Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_G02
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.1
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.5
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.6
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.5
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 4.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.5
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.5
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 6.0
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 6.0
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = +3
Query: 567 PXPXXXXSPGPXXPLXGGXXG--PXXKKXPWXXXXPPHXXXPXXXPXXGXXGXPXG 728
P P +PG P GG G P P PP P P G G P G
Sbjct: 412 PPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGG 467
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +3
Query: 567 PXPXXXXSPGPXXPLXGGXXGPXXKKXPWXXXXPPHXXXPXXXPXXGXXGXPXGXXGXP 743
P P GP P G GP K P PP P P P G G P
Sbjct: 134 PPPCKPCPEGPPGP--AGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGKP 190
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 2/72 (2%)
Frame = +3
Query: 546 PXXPXXXPXPXXXXSPGPXXPLXGGXXGPXXKKX--PWXXXXPPHXXXPXXXPXXGXXGX 719
P P P PG P+ GG P P PP P P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 720 PXGXXGXPXXPP 755
P G G P PP
Sbjct: 777 PGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 545 PXXPXXXPPPXPXPXPGA--XXPPXXGVXGXXX*KXPLXXXXXPPLK 679
P P PPP P P PG PP G P+ PP K
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 2/72 (2%)
Frame = +3
Query: 546 PXXPXXXPXPXXXXSPGPXXPLXGGXXGPXXKKX--PWXXXXPPHXXXPXXXPXXGXXGX 719
P P P PG P+ GG P P PP P P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 720 PXGXXGXPXXPP 755
P G G P PP
Sbjct: 777 PGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 545 PXXPXXXPPPXPXPXPGA--XXPPXXGVXGXXX*KXPLXXXXXPPLK 679
P P PPP P P PG PP G P+ PP K
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 2/72 (2%)
Frame = +3
Query: 546 PXXPXXXPXPXXXXSPGPXXPLXGGXXGPXXKKX--PWXXXXPPHXXXPXXXPXXGXXGX 719
P P P PG P+ GG P P PP P P
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 720 PXGXXGXPXXPP 755
P G G P PP
Sbjct: 360 PGGFKGGPPPPP 371
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 545 PXXPXXXPPPXPXPXPGA--XXPPXXGVXGXXX*KXPLXXXXXPPLK 679
P P PPP P P PG PP G P+ PP K
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 391
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 545 PXXPXXXPPPXPXPXPGAXXPP 610
P P PPP P P P A PP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPP 23
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 545 PXXPXXXPPPXPXPXPGAXXPP 610
P P PPP P P P A PP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPP 23
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/84 (26%), Positives = 23/84 (27%), Gaps = 9/84 (10%)
Frame = +3
Query: 546 PXXPXXXPXPXXXXSPGPXXPLXG---------GXXGPXXKKXPWXXXXPPHXXXPXXXP 698
P P P P SPGP P G P + P PP P
Sbjct: 197 PVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRR 256
Query: 699 XXGXXGXPXGXXGXPXXPPXHXXP 770
G G P P PP P
Sbjct: 257 PPGPPGPPTRRPPGPPGPPTRRPP 280
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +1
Query: 553 PXXPPPXPPXPXPRGRGXPXXGGXXXPXLKKXLGGXGXPP 672
P PPP P P G P GG P L G G PP
Sbjct: 787 PGAPPPPGMRPPP---GAPGGGGGMYPPLIPTRPGPGGPP 823
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 546 PXXPXXXPXPXXXXSPGPXXPLXGGXXGPXXKKXPWXXXXPPHXXXPXXXPXXGXXGXPX 725
P P P P +P P P G P P PP P G P
Sbjct: 272 PMPPPMPPTPGM--TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG-PP 328
Query: 726 GXXGXPXXPP 755
G G P PP
Sbjct: 329 GMGGMPPPPP 338
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = +3
Query: 606 PLXGGXXGPXXKKXPWXXXXPPHXXXPXXXPXXGXXGXPXGXXGXP--XXPPXHXXPXXX 779
P GG GP PP P P G P G G P PP P
Sbjct: 146 PPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEA 205
Query: 780 XPS 788
PS
Sbjct: 206 PPS 208
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/102 (26%), Positives = 27/102 (26%), Gaps = 6/102 (5%)
Frame = +3
Query: 573 PXXXXSPGPXXPLX----GGXXGPXXKKXPWXXXXPPHXXXPXXXPXXGXXGXPXGXXGX 740
P PGP P GG GP PP P P G P G
Sbjct: 281 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 340
Query: 741 P--XXPPXHXXPXXXXPSFXFSPXPGXXXGXVXXXXXNPPXP 860
P PP P PS PG PP P
Sbjct: 341 PPSGGPPGPFNPSGAPPS---GGPPGPFDPSGAPPSGGPPGP 379
Score = 28.7 bits (61), Expect = 6.0
Identities = 27/102 (26%), Positives = 27/102 (26%), Gaps = 6/102 (5%)
Frame = +3
Query: 573 PXXXXSPGPXXPLX----GGXXGPXXKKXPWXXXXPPHXXXPXXXPXXGXXGXPXGXXGX 740
P PGP P GG GP PP P P G P G
Sbjct: 356 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 415
Query: 741 P--XXPPXHXXPXXXXPSFXFSPXPGXXXGXVXXXXXNPPXP 860
P PP P PS PG PP P
Sbjct: 416 PPSGGPPGPFNPSGAPPS---GGPPGPFNPSGAPPSGGPPGP 454
Score = 28.7 bits (61), Expect = 6.0
Identities = 27/102 (26%), Positives = 27/102 (26%), Gaps = 6/102 (5%)
Frame = +3
Query: 573 PXXXXSPGPXXPLX----GGXXGPXXKKXPWXXXXPPHXXXPXXXPXXGXXGXPXGXXGX 740
P PGP P GG GP PP P P G P G
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 460
Query: 741 P--XXPPXHXXPXXXXPSFXFSPXPGXXXGXVXXXXXNPPXP 860
P PP P PS PG PP P
Sbjct: 461 PPSGGPPGPFNPSGAPPS---GGPPGPFDPSGAPPSGGPPGP 499
Score = 28.3 bits (60), Expect = 7.9
Identities = 27/102 (26%), Positives = 27/102 (26%), Gaps = 6/102 (5%)
Frame = +3
Query: 573 PXXXXSPGPXXPLX----GGXXGPXXKKXPWXXXXPPHXXXPXXXPXXGXXGXPXGXXGX 740
P PGP P GG GP PP P P G P G
Sbjct: 326 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 385
Query: 741 P--XXPPXHXXPXXXXPSFXFSPXPGXXXGXVXXXXXNPPXP 860
P PP P PS PG PP P
Sbjct: 386 PPSGGPPGPFDPSGAPPS---GGPPGPFNPSGAPPSGGPPGP 424
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/78 (28%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Frame = +3
Query: 573 PXXXXSPGPXXPLX----GGXXGPXXKKXPWXXXXPPHXXXPXXXPXXGXXGXPXGXXGX 740
P PGP P GG GP PP P P G P G
Sbjct: 446 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 505
Query: 741 P--XXPPXHXXPXXXXPS 788
P PP P PS
Sbjct: 506 PPSGGPPGPFDPSGAPPS 523
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 546 PXXPXXXPXPXXXXSPGPXXPLXGGXXGPXXKKXPWXXXXPPHXXXPXXXPXXGXXGXPX 725
P P P P +P P P G P P PP P G P
Sbjct: 282 PMPPPMPPTPGM--TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG-PP 338
Query: 726 GXXGXPXXPP 755
G G P PP
Sbjct: 339 GMGGMPPPPP 348
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +1
Query: 553 PXXPPPXPPXPXPRGRGXPXXGGXXXPXLKKXLGGXGXPP 672
P PPP P P G P GG P L G G PP
Sbjct: 787 PGAPPPPGMRPPP---GAPGGGGGMYPPLIPTRPGPGGPP 823
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/72 (26%), Positives = 21/72 (29%)
Frame = +1
Query: 562 PPPXPPXPXPRGRGXPXXGGXXXPXLKKXLGGXGXPPTXXXRXXXXSXGXXAXPXAXXXX 741
PP P P P +G P G P G PP G P A
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG--SPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Query: 742 LXXRXNTXXPPP 777
R + PPP
Sbjct: 290 PPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/72 (26%), Positives = 21/72 (29%)
Frame = +1
Query: 562 PPPXPPXPXPRGRGXPXXGGXXXPXLKKXLGGXGXPPTXXXRXXXXSXGXXAXPXAXXXX 741
PP P P P +G P G P G PP G P A
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG--SPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Query: 742 LXXRXNTXXPPP 777
R + PPP
Sbjct: 311 PPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/72 (26%), Positives = 21/72 (29%)
Frame = +1
Query: 562 PPPXPPXPXPRGRGXPXXGGXXXPXLKKXLGGXGXPPTXXXRXXXXSXGXXAXPXAXXXX 741
PP P P P +G P G P G PP G P A
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG--SPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Query: 742 LXXRXNTXXPPP 777
R + PPP
Sbjct: 296 PPPRAGSPPPPP 307
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +3
Query: 594 GPXXPLXGGXXGPXXKKXPWXXXXPPHXXXPXXXPXXGXXGXPXGXXGXPXXPPXHXXP 770
GP PL GG P + P PP P G G P G G PP P
Sbjct: 153 GPP-PLMGGGGDP--RGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP 208
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +3
Query: 594 GPXXPLXGGXXGPXXKKXPWXXXXPPHXXXPXXXPXXGXXGXPXGXXGXPXXPPXHXXP 770
GP PL GG P + P PP P G G P G G PP P
Sbjct: 433 GPP-PLMGGGGDP--RGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP 488
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,506,422
Number of Sequences: 27780
Number of extensions: 314345
Number of successful extensions: 1513
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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