BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F24
(953 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 1.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.1
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 5.4
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 7.1
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 7.1
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 22 9.4
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 9.4
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 22 9.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 9.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 9.4
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.3
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 518 PXPXPXPPPPAPPXP 562
P P P PPPP+ P
Sbjct: 339 PKPAPPPPPPSSSGP 353
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 509 PPTPXPXPXPPPPAPP 556
PP P P P PP + P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 21.8 bits (44), Expect = 9.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 536 PPPPAPPXP 562
PP PAPP P
Sbjct: 338 PPKPAPPPP 346
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect(2) = 1.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 398 QXPPXPPPAP 427
Q PP PPP P
Sbjct: 1353 QQPPPPPPPP 1362
Score = 20.6 bits (41), Expect(2) = 1.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 524 PXPXPPPPA 550
P P PPPP+
Sbjct: 1355 PPPPPPPPS 1363
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.4 bits (48), Expect = 3.1
Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 2/18 (11%)
Frame = +2
Query: 509 PPTPXPXPXP--PPPAPP 556
PP P P P PP APP
Sbjct: 39 PPNPSQGPPPGGPPGAPP 56
Score = 23.0 bits (47), Expect = 4.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 497 PXRRPPTPXPXPXPPPPAPP 556
P R P P P PPP PP
Sbjct: 34 PQRGSP-PNPSQGPPPGGPP 52
Score = 22.2 bits (45), Expect = 7.1
Identities = 13/48 (27%), Positives = 15/48 (31%)
Frame = +2
Query: 407 PXPPPAPXXLXXXPPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPPA 550
P P P+P P SP P PP+ P PA
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISPA 68
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 5.4
Identities = 7/28 (25%), Positives = 19/28 (67%), Gaps = 4/28 (14%)
Frame = +3
Query: 222 WRLXMLCWDVL----WSYYSFSSESVLR 293
W + ++CW+V+ Y+++S++ V++
Sbjct: 822 WSMGIVCWEVMSYGERPYWNWSNQDVIK 849
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 22.2 bits (45), Expect = 7.1
Identities = 12/47 (25%), Positives = 12/47 (25%)
Frame = +2
Query: 407 PXPPPAPXXLXXXPPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P P P PP P
Sbjct: 120 PEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 166
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 81 PRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHP 114
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 107 PQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 140
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 7.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 136 TPEMXKYQNELNKTHSNFDRASGXKAIYI 50
TP +N LNK H +F +G I++
Sbjct: 179 TPHGWMRRNVLNKQHVHFHDYTGSVVIHV 207
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 52 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 85
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 108 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 141
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 164 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 197
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 192 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 225
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 220 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 253
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 248 PRPPHPRLRREAKPEAKPGNNRPVYIPQPRPPHP 281
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 53 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 86
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 81 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 114
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 109 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 142
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 24 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 57
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 52 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 85
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 80 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 113
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 108 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 141
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 136 PRPPHPRLRREAKPEAEPGNNRPVYIPQPRPPHP 169
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/34 (29%), Positives = 10/34 (29%)
Frame = +2
Query: 446 PPPXSPXXXXPXXXXLXPXRRPPTPXPXPXPPPP 547
P P P P P P P PP P
Sbjct: 164 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 197
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 9.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 81 IARPAXKRSTLTLKS*GIPYSEWY 10
+ RP +TL + G P EWY
Sbjct: 1323 VVRPWRGSATLACNAVGDPTREWY 1346
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 9.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 81 IARPAXKRSTLTLKS*GIPYSEWY 10
+ RP +TL + G P EWY
Sbjct: 1319 VVRPWRGSATLACNAVGDPTREWY 1342
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,794
Number of Sequences: 438
Number of extensions: 4467
Number of successful extensions: 35
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31323201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -