Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F18
(963 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 44 1e-04
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 41 0.002
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 41 0.002
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 41 0.002
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 40 0.002
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 40 0.002
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 40 0.003
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 38 0.011
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 38 0.011
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 38 0.011
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 38 0.014
U42436-10|AAF99899.1| 272|Caenorhabditis elegans Ribosomal prot... 37 0.019
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 34 0.13
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 33 0.23
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.23
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.23
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.23
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.30
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 33 0.30
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 33 0.40
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 33 0.40
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 33 0.40
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.40
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.40
AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule abn... 31 0.92
AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule abn... 31 0.92
AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein. 31 0.92
Z68003-3|CAA91977.1| 849|Caenorhabditis elegans Hypothetical pr... 31 1.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.2
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 1.2
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 1.6
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.6
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.1
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 3.7
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 3.7
AF098992-8|AAC67454.2| 239|Caenorhabditis elegans Hypothetical ... 29 3.7
Z74032-9|CAA98464.2| 80|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical pr... 29 4.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.9
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 4.9
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 29 4.9
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 4.9
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 29 4.9
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 4.9
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 24 5.3
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 24 5.4
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 24 5.8
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 29 6.5
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 6.5
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 6.5
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 8.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.6
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 8.6
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 28 8.6
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 28 8.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.6
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 8.6
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 45.2 bits (102), Expect = 7e-05
Identities = 25/61 (40%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -2
Query: 779 WGS*RG--WRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXG 606
WG RG W G GG G G G GG G G RG GG GG GG G
Sbjct: 64 WGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGG 123
Query: 605 G 603
G
Sbjct: 124 G 124
Score = 42.7 bits (96), Expect = 4e-04
Identities = 28/64 (43%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -2
Query: 785 GXWGS*RG---WRX-GGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGER 618
G WG+ G W GG G GGRG GG G GG G G G GG GG GG R
Sbjct: 70 GGWGNNGGGGNWGGNGGGGNGGGGRGGGGG-GGGGRGGGGGGRGGGGGGGGGRGGGGGGR 128
Query: 617 XXXG 606
G
Sbjct: 129 GGGG 132
Score = 35.5 bits (78), Expect = 0.057
Identities = 23/55 (41%), Positives = 23/55 (41%)
Frame = -2
Query: 788 SGXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGG 624
SG WG GW GG G GG G G G GG G G GG G GG
Sbjct: 40 SGGWGR-PGWGGGGPGWGRGGGG--SGWGGGRGGGWG---NNGGGGNWGGNGGGG 88
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/61 (45%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXG-GERXXX 609
G G G R GG R G GRG G G GG G G R G GG GG G GER
Sbjct: 127 GNNGGGGGGRGGGGRGG-DGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGGAGERIAE 185
Query: 608 G 606
G
Sbjct: 186 G 186
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/69 (37%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Frame = -2
Query: 785 GXWGS*RG--WRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGX----GG 624
G WG+ G W GG R G G GG G G G G G GG GG GG
Sbjct: 47 GGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGG 106
Query: 623 ERXXXGGVW 597
GG W
Sbjct: 107 NNNGGGGNW 115
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/61 (39%), Positives = 24/61 (39%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXG 606
G WG G R G GGRG GG G G G G GG GG GG G
Sbjct: 76 GNWGGNGGGRGDWGGNGGGGRG-GGGRGDWGGNNNGGGGNWGGGGNN-DGGWGGNNGGGG 133
Query: 605 G 603
G
Sbjct: 134 G 134
Score = 36.3 bits (80), Expect = 0.033
Identities = 29/66 (43%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGR-GXX---GGXGXXXXGGXGXGTRRG-XGGEXCXGGXGGE 621
G WG GW GG R G GG G GG G GG G G G GG GG GG
Sbjct: 30 GRWG---GW--GGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGG 84
Query: 620 RXXXGG 603
R GG
Sbjct: 85 RGDWGG 90
Score = 34.7 bits (76), Expect = 0.099
Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = -2
Query: 785 GXWG-S*RGWRXGGXRXGVGGRGXXG----GXGXXXXGGXGXGTRRGXGGEXCXGGXGGE 621
G WG + G R GG R GG G G G GG G G G GG GG GG+
Sbjct: 86 GDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWG-GNNGGGGGGRGGGGRGGD 144
Score = 33.5 bits (73), Expect = 0.23
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = -2
Query: 785 GXWGS*RGW-RXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXX 609
G G GW GG G GG G G GG G G G+ G GG
Sbjct: 41 GGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGG 100
Query: 608 GGVW 597
G W
Sbjct: 101 RGDW 104
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/58 (44%), Positives = 27/58 (46%)
Frame = -2
Query: 776 GS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
G RG GG R G GG G G G GG G R G GG+ GG GG R GG
Sbjct: 674 GGGRGGYGGGDRGGRGGYGGDRG-GRGGYGGGDRGGRGGYGGDRGRGGYGG-RGGRGG 729
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/58 (44%), Positives = 27/58 (46%)
Frame = -2
Query: 776 GS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
G RG GG R G GG G G G GG G R G GG+ GG GG R GG
Sbjct: 715 GGGRGGYGGGDRGGRGGYGGDRG-GRGGYGGGDRGGRGGYGGDRGRGGYGG-RGGRGG 770
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/58 (44%), Positives = 27/58 (46%)
Frame = -2
Query: 776 GS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
G RG GG R G GG G G G GG G R G GG+ GG GG R GG
Sbjct: 674 GGGRGGYGGGDRGGRGGYGGDRG-GRGGYGGGDRGGRGGYGGDRGRGGYGG-RGGRGG 729
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/51 (49%), Positives = 25/51 (49%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGG 633
G WG GW GG R G GGRG GG GG G G RG GG GG
Sbjct: 56 GGWGGRGGWGRGGGR-GYGGRG--GG-----WGGRGGGWGRGGGGRGFYGG 98
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/53 (45%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -2
Query: 764 GWRXGGXRXGVGGRGXXGGXGXXXXG----GXGXGTRRGXGGEXCXGGXGGER 618
G R GG R G GGRG G G G G G G R G GG+ G GG R
Sbjct: 521 GDRDGGFRGGFGGRGGGGFRGGDRGGFRGRGGGGGFRGGRGGDRGGGFRGGRR 573
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = -2
Query: 788 SGXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXX 609
+G WG +G + GG GGRG GG G G G++ G GG+ GG GG +
Sbjct: 145 AGGWGGSQGGQNGG-----GGRGGSGGQGGWG-GSQDGGSQGGWGGQN-GGGQGGNQGGG 197
Query: 608 GG 603
GG
Sbjct: 198 GG 199
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = -2
Query: 776 GS*RGWRXGGXRXGVGGRGXX-GGXGXXXXGGXGX-GTRRGXG--GEXCXGGXGGERXXX 609
G RG GG + G GG+G GG GG G G ++G G G+ GG GG
Sbjct: 197 GGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGPGGWGG--GGR 254
Query: 608 GGVWATWXR 582
GG W W R
Sbjct: 255 GGGWGGWGR 263
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/61 (36%), Positives = 25/61 (40%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXG 606
G WG G GG + G GGRG G G G G G +G GG G + G
Sbjct: 180 GGWGGQNGGGQGGNQGGGGGRG--GNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQG 237
Query: 605 G 603
G
Sbjct: 238 G 238
Score = 37.9 bits (84), Expect = 0.011
Identities = 26/68 (38%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Frame = -2
Query: 788 SGXWG----S*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGG--XG 627
SG WG S G GG GG GG G G G G R G GG+ GG G
Sbjct: 117 SGGWGGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGGSQDG 176
Query: 626 GERXXXGG 603
G + GG
Sbjct: 177 GSQGGWGG 184
Score = 37.5 bits (83), Expect = 0.014
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXX-GGXGXGTRRGXGGEXCXGGXG 627
G WG+ +G + GG R G G G GG G GG G G+R G G GG G
Sbjct: 227 GGWGN-QGGQQGGGRGGQQGPGGWGGGGRGGGWGGWGRGSRWGW-GRPSWGGWG 278
Score = 35.9 bits (79), Expect = 0.043
Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGG-RGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXX 609
G G RG GG G GG RG GG G G G GG G G +
Sbjct: 54 GGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGSQGGSQ 113
Query: 608 GGVWATW 588
GG W
Sbjct: 114 GGSSGGW 120
Score = 33.1 bits (72), Expect = 0.30
Identities = 23/61 (37%), Positives = 27/61 (44%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXG 606
G WG G + GG + G GG+ G G G G G GGE GG GG+ G
Sbjct: 168 GGWG---GSQDGGSQGGWGGQ---NGGGQGGNQGGGGGRGGNQGGE--QGGWGGQGGSQG 219
Query: 605 G 603
G
Sbjct: 220 G 220
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 13/68 (19%)
Frame = -2
Query: 788 SGXWGS*RGWRXGGXRXGVGG---------RGXXGG--XGXXXXGGXG--XGTRRGXGGE 648
+G WG +G GG G GG +G GG G GG G G + G GG
Sbjct: 102 AGGWGGSQGGSQGGSSGGWGGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGGGGR 161
Query: 647 XCXGGXGG 624
GG GG
Sbjct: 162 GGSGGQGG 169
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/65 (38%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -2
Query: 788 SGXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXG-GERXX 612
SG WG G G GG G GG G GG G G+ G GG GG G G
Sbjct: 35 SGGWGG-SDASAGASAGGTGG-GRGGGRGGSG-GGRGGGSGGGRGG---SGGAGAGGSGS 88
Query: 611 XGGVW 597
G W
Sbjct: 89 GSGGW 93
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXG 606
G WG +G G G GG G GG G G GG G GG G
Sbjct: 133 GGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQG-----GWGGSQDGGSQGGWGGQNG 187
Query: 605 G 603
G
Sbjct: 188 G 188
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 38.3 bits (85), Expect = 0.008
Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Frame = -2
Query: 761 WRXGGXRXGVGGRG--XXGGXGXXXXGG-XGXGTRRGXGGEXCXGGXGGERXXXGG 603
W GG R G GG GG G GG G G G GG G GG R GG
Sbjct: 45 WNNGGGRGGFGGNNGWNNGGGGFNGNGGFNGGGRGGGRGGNGGFGDNGGLRGGNGG 100
Score = 34.7 bits (76), Expect = 0.099
Identities = 23/55 (41%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 764 GWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGG-EXCXGGXGGERXXXGG 603
G+ GG G GG G G G GG G G R G GG + GG GG GG
Sbjct: 72 GFNGGGRGGGRGGNGGFGDNGGLR-GGNGGG-RGGNGGFDDNGGGRGGNGGGRGG 124
Score = 32.7 bits (71), Expect = 0.40
Identities = 21/54 (38%), Positives = 21/54 (38%)
Frame = -2
Query: 764 GWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
G R G GGRG GG GG G G G GG GG R GG
Sbjct: 38 GPRGPGEWNNGGGRGGFGGNNGWNNGGGGFNGNGGFNG----GGRGGGRGGNGG 87
Score = 32.3 bits (70), Expect = 0.53
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -2
Query: 752 GGXRXGVGG-RGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
GG R G GG RG GG G G G G G GG GG GG
Sbjct: 112 GGGRGGNGGGRGGTGGFGDNGGGRGGNGG--GRGGNGGGNNGGGRGGNGGG 160
Score = 31.5 bits (68), Expect = 0.92
Identities = 25/63 (39%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXG--XGTRRGXGGEXCXGGXGGERXX 612
G G RG GG GGRG GG G GG G G R G GG G G
Sbjct: 96 GGNGGGRGGN-GGFDDNGGGRGGNGG-GRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGG 153
Query: 611 XGG 603
GG
Sbjct: 154 RGG 156
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 37.9 bits (84), Expect = 0.011
Identities = 24/61 (39%), Positives = 25/61 (40%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXG 606
G GS G GG GG G GG G GG G + G GG GG GG G
Sbjct: 781 GPTGSSGGGGGGGNGGSGGGGGGGGG-GSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNG 839
Query: 605 G 603
G
Sbjct: 840 G 840
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 37.9 bits (84), Expect = 0.011
Identities = 23/56 (41%), Positives = 24/56 (42%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGER 618
G +GS GW GG GGR G GG G G G GG GG GG R
Sbjct: 225 GGYGSGGGWGGGG-----GGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGGRR 275
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = -2
Query: 731 GGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
GGRG GG GG G G R G GG+ G GG GG
Sbjct: 5 GGRGGGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFGGG 47
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/60 (41%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -2
Query: 776 GS*RGWRXGGXRXGVGG--RGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
G RG R G R G GG RG GG GG G G R G G G GG GG
Sbjct: 161 GGDRGGR-GSDRGGRGGFGRGGGGGFRGGDRGGFGGG-RGGFRGGDRGGFRGGRGGDFGG 218
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = -2
Query: 752 GGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
G R G G G GG G G G G RG GG G GG+R GG
Sbjct: 152 GRGRGGRGRGGDRGGRGSDRGGRGGFG--RGGGG----GFRGGDRGGFGG 195
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 37.5 bits (83), Expect = 0.014
Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGV-GGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXX 609
G G G+ GG R G GGRG GG GG G R G G G GG+R
Sbjct: 317 GFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRGGFRGGDRGGFRGGDRGGD 376
Query: 608 GG 603
G
Sbjct: 377 RG 378
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Frame = -2
Query: 752 GGXRXGV-GGRGXXGGXGXXXXGGXG--XGTRRGXGGEXCXGGXGGERXXXGG 603
GG R G GGRG GG GG G G RRG G G + GG
Sbjct: 108 GGSRGGYDGGRGGYGGDRGGRGGGRGGYDGERRG-GSRWDDGNSDRQGGPPGG 159
>U42436-10|AAF99899.1| 272|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 2 protein.
Length = 272
Score = 37.1 bits (82), Expect = 0.019
Identities = 21/55 (38%), Positives = 22/55 (40%)
Frame = -2
Query: 752 GGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGGVWATW 588
GG + G GGRG GG G G R G GG GG GG G W
Sbjct: 5 GGFQSGFGGRG--GGRGGARPAGDRPAGRGGRGGRGGRGGRGGRAGRGGEKETEW 57
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGX--GXXXXGGXGXGTRRGXGGEXCXGGXGG 624
G G G+ GG G GG G G G GG G G G GG GG GG
Sbjct: 65 GFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGGGGGGG 120
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/58 (37%), Positives = 23/58 (39%)
Frame = -2
Query: 776 GS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
G G R GG G G G GG G G G R G GG GG+R GG
Sbjct: 163 GQYMGDRRGGGSSGGGRFGGGGGDRFNDRGSRG-GDRYGGDRRGGGGGGGGDRYGGGG 219
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 33.5 bits (73), Expect = 0.23
Identities = 21/45 (46%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -2
Query: 749 GXRXGVGGR-GXXGGXGXXXXGGXGXGTRRG--XGGEXCXGGXGG 624
G R G GGR G GG G GG G RG GG GG GG
Sbjct: 806 GQRGGYGGRGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGG 850
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = -2
Query: 764 GWRXGGXRXGVGGRGXXGG-XGXXXXGG--XGXGTRRGXGGEXCXGGXGG 624
G R GG G GRG GG G GG G G G GG GG GG
Sbjct: 812 GGRGGGF--GGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGGGSFGGSGG 859
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLL-VPXPXPPXXXXP 705
PP SPP PP SPP P P P PP P
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 622 SPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
SPP PP SPP P P PP P
Sbjct: 254 SPPPPPAAGSPPPPRTGSPPPPPTGSPP 281
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 595 AQTPPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
A +PP P PP SPP P P PP P
Sbjct: 261 AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
PP SPP PP SPP P P PP P
Sbjct: 257 PPPAAGSPP-PPRTGSPPPPPTGSPPPPPAGGSP 289
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLL-VPXPXPPXXXXP 705
PP SPP PP SPP P P P PP P
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 622 SPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
SPP PP SPP P P PP P
Sbjct: 275 SPPPPPAAGSPPPPRTGSPPPPPTGSPP 302
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 595 AQTPPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
A +PP P PP SPP P P PP P
Sbjct: 282 AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
PP SPP PP SPP P P PP P
Sbjct: 278 PPPAAGSPP-PPRTGSPPPPPTGSPPPPPAGGSP 310
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLL-VPXPXPPXXXXP 705
PP SPP PP SPP P P P PP P
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 622 SPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
SPP PP SPP P P PP P
Sbjct: 260 SPPPPPAAGSPPPPRTGSPPPPPTGSPP 287
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 595 AQTPPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
A +PP P PP SPP P P PP P
Sbjct: 267 AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
PP SPP PP SPP P P PP P
Sbjct: 263 PPPAAGSPP-PPRTGSPPPPPTGSPPPPPAGGSP 295
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPP 690
PP PP P Q PP P+ P P PP
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPP 69
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPP 690
PP PP P PP P + P P PP
Sbjct: 52 PPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 33.1 bits (72), Expect = 0.30
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = -2
Query: 767 RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
+G GG R G GG G G + R GG GG GGE GG
Sbjct: 52 KGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGG 106
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -2
Query: 725 RGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
RG GG GG G+R G GG G GG+R GG
Sbjct: 8 RGGGGGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGG 48
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -2
Query: 731 GGRGXXGGXGXXXXGGXGXGTRRGX-GGEXCXGGXGGERXXXGGVW 597
GG G GG G G+ G GG GG GG GG W
Sbjct: 344 GGSGSNGGSGGGNTDNDNWGSNNGNSGGSWGNGGTGGSGGSGGGNW 389
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -2
Query: 731 GGRGXXGGXGXXXXGGXGXGTRRGX-GGEXCXGGXGGERXXXGGVW 597
GG G GG G G+ G GG GG GG GG W
Sbjct: 344 GGSGSNGGSGGGNTDNDNWGSNNGNSGGSWGNGGTGGSGGSGGGNW 389
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 731 GGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
GG G GG G GG G G C GG GG GG
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGG 68
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 731 GGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
GG G GG G GG G G C GG GG GG
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGG 68
>AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule
abnormality protein 3,isoform b protein.
Length = 628
Score = 31.5 bits (68), Expect = 0.92
Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -2
Query: 767 RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGE--RXXXGG 603
RG GG GGRG GG GG G G+R GG+ G GE R GG
Sbjct: 562 RGSYGGGRGGDRGGRGAYGGD--RGRGGSGDGSRGYRGGDRGGRGSYGEGSRGYQGG 616
>AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule
abnormality protein 3,isoform a protein.
Length = 693
Score = 31.5 bits (68), Expect = 0.92
Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -2
Query: 767 RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGE--RXXXGG 603
RG GG GGRG GG GG G G+R GG+ G GE R GG
Sbjct: 627 RGSYGGGRGGDRGGRGAYGGD--RGRGGSGDGSRGYRGGDRGGRGSYGEGSRGYQGG 681
>AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein.
Length = 693
Score = 31.5 bits (68), Expect = 0.92
Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -2
Query: 767 RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGE--RXXXGG 603
RG GG GGRG GG GG G G+R GG+ G GE R GG
Sbjct: 627 RGSYGGGRGGDRGGRGAYGGD--RGRGGSGDGSRGYRGGDRGGRGSYGEGSRGYQGG 681
>Z68003-3|CAA91977.1| 849|Caenorhabditis elegans Hypothetical
protein E02H4.4 protein.
Length = 849
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -2
Query: 752 GGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
GG GGRG G G G G+ G GGE G G GG
Sbjct: 753 GGESVVPGGRGSAEGGGGASVVPDGRGSSDGGGGESVVPGGRGSSDGGGG 802
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 752 GGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
GG GG G G G G G+ G GGE G G GG
Sbjct: 721 GGESVVPGGCGSSEGGGGESVVPGGRGSLEGGGGESVVPGGRGSAEGGGG 770
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 625 PPXPPXQXSPPXPLLVPXPXPPXXXXP 705
PP P Q PP P+ P P PP P
Sbjct: 57 PPPCPAQFCPPPPICPPPPPPPMPCPP 83
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPP 690
PP PP PP PP P +P P P
Sbjct: 66 PPPPICPPPPPPPMPCPPPPPPMPRPSCP 94
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVG--GRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGG 624
G +G G GG G G G G G G GG G G GG+ GG GG
Sbjct: 77 GGYGGSGGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDG-GGGYGG 131
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/75 (32%), Positives = 27/75 (36%), Gaps = 13/75 (17%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTR-------------RGXGGEX 645
G G G+ G G GG G GG G GG G G G GG+
Sbjct: 58 GGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGGGQR 117
Query: 644 CXGGXGGERXXXGGV 600
GG GG GG+
Sbjct: 118 QGGGGGGFGDILGGI 132
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 749 GXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGG 624
G G GG G G G G GGE GG GG
Sbjct: 493 GETPAAGAGAGGGGGGHVASAGGGISAMTGAGGEAPGGGAGG 534
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 749 GXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGG 624
G G GG G G G G GGE GG GG
Sbjct: 493 GETPAAGAGAGGGGGGHVASAGGGISAMTGAGGEAPGGGAGG 534
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 622 SPPXPPXQXSPPXPLLVPXPXPP 690
SPP PP PP L P P PP
Sbjct: 1337 SPPPPPPPPPPPSDDLTPVPPPP 1359
Score = 23.8 bits (49), Expect(2) = 5.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 925 SXPXXPXPPPPP 960
S P P PPPPP
Sbjct: 1337 SPPPPPPPPPPP 1348
Score = 23.4 bits (48), Expect(2) = 5.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 940 PXPPPPPP 963
P PPPPPP
Sbjct: 1354 PVPPPPPP 1361
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXG 606
G G G GG G GG+ G G GG G G GG GG G G
Sbjct: 19 GSGGGFGGGNNGGSGFG-GGKNGGTGFGGGNTGGSGFG-GGNTGGSGFGGGKAGGSGFGG 76
Query: 605 G 603
G
Sbjct: 77 G 77
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -2
Query: 764 GWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGG 624
G GG G GG G G GG G G GG C G GG
Sbjct: 46 GGNTGGSGFG-GGNTGGSGFGGGKAGGSGFG-----GGNTCGSGFGG 86
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGG--RGXXGGXGXXXXGGXGXG---TRRGXGGEXCXGGXG 627
G +G + GG R G+ G RG GG G G G G RRG G G G
Sbjct: 533 GAYGDFGAYGGGGFRGGMRGSPRGGMGGGGGFRGGPPGRGGMANRRGRGKRPGDGRGG 590
>AF098992-8|AAC67454.2| 239|Caenorhabditis elegans Hypothetical
protein F53C3.3 protein.
Length = 239
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = -2
Query: 776 GS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGG 651
G RG GG R GVGGR GG G GG + GG
Sbjct: 24 GGGRGGGGGGARGGVGGR---GGGGSFRSGGARSSSSSFRGG 62
>Z74032-9|CAA98464.2| 80|Caenorhabditis elegans Hypothetical
protein F35B12.7 protein.
Length = 80
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -2
Query: 728 GRGXXGGXGXXXXGGX-GXGTRRGXGGEXCXGGXGG 624
G G GG G GG G G G GG GG GG
Sbjct: 22 GGGPYGGYGPRGYGGGYGGGRYGGYGGRGPYGGYGG 57
>Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical
protein ZK596.1 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -2
Query: 731 GGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGER 618
GG+G GG GG G + G GG GG GG +
Sbjct: 160 GGQGPFGGFPGGHQGGFPGGNQGGFGGN--QGGFGGNQ 195
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
P +SPP PP P VP P PP P
Sbjct: 489 PAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = -2
Query: 767 RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGGVWATW 588
R R G R G G G GG G GG G +RG G G GG+ G W
Sbjct: 204 RETRGGRSRDGQRG-GYNGGGGGG--GGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGW 260
Query: 587 XRR 579
++
Sbjct: 261 GQQ 263
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/55 (38%), Positives = 23/55 (41%)
Frame = -2
Query: 767 RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
R R G R G G G GG G GG G +RG G G GG+ GG
Sbjct: 166 RETRGGRSRDGQRG-GYNGGGGGG--GGWGGPAQRGGPGAYGGPGGGGQGGYGGG 217
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = -2
Query: 767 RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGGVWATW 588
R R G R G G G GG G GG G +RG G G GG+ G W
Sbjct: 166 RETRGGRSRDGQRG-GYNGGGGGG--GGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGW 222
Query: 587 XRR 579
++
Sbjct: 223 GQQ 225
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/55 (38%), Positives = 23/55 (41%)
Frame = -2
Query: 767 RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
R R G R G G G GG G GG G +RG G G GG+ GG
Sbjct: 204 RETRGGRSRDGQRG-GYNGGGGGG--GGWGGPAQRGGPGAYGGPGGGGQGGYGGG 255
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = -2
Query: 767 RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGGVWATW 588
R R G R G G G GG G GG G +RG G G GG+ G W
Sbjct: 204 RETRGGRSRDGQRG-GYNGGGGGG--GGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGW 260
Query: 587 XRR 579
++
Sbjct: 261 GQQ 263
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 23.8 bits (49), Expect(2) = 5.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 925 SXPXXPXPPPPP 960
S P P PPPPP
Sbjct: 763 SIPPPPPPPPPP 774
Score = 23.4 bits (48), Expect(2) = 5.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 940 PXPPPPPP 963
P PPPPPP
Sbjct: 809 PPPPPPPP 816
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 23.8 bits (49), Expect(2) = 5.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 925 SXPXXPXPPPPP 960
S P P PPPPP
Sbjct: 763 SIPPPPPPPPPP 774
Score = 23.4 bits (48), Expect(2) = 5.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 940 PXPPPPPP 963
P PPPPPP
Sbjct: 808 PPPPPPPP 815
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXP 663
PP ++PP PP +PP P
Sbjct: 192 PPPTTKAPP-PPTTKAPPPP 210
Score = 23.4 bits (48), Expect(2) = 5.8
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 637 PXQXSPPXPLLVPXPXPPXXXXP 705
P + +PP P VP P P P
Sbjct: 250 PTKAAPPAPTPVPNPVPSPPPPP 272
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 28.7 bits (61), Expect = 6.5
Identities = 24/55 (43%), Positives = 25/55 (45%)
Frame = -2
Query: 767 RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGG 603
RG R GG R G R G G GG G G+RRG GG GG R GG
Sbjct: 121 RGGR-GGIRHDSGSRDAEEG-GAPRGGGRG-GSRRGGGGR------GGGRTNSGG 166
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical protein
T07D4.3 protein.
Length = 1301
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -2
Query: 728 GRGXXGGXGXXXXG-GXGXGTRRGXGGEXCXGGXGG 624
GRG G G G G G G R G GG G GG
Sbjct: 1258 GRGNYGNVGSGYRGAGGGGGYRGGRGGRGGGRGGGG 1293
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXG 606
G G G GG G GG+ G G GG G G GG GG G G
Sbjct: 19 GSGGGFGGGNNGGSGFG-GGKNGGTGFGGGNTGGSGFG-GGNTGGSGFGGGKTGGSGFGG 76
Query: 605 G 603
G
Sbjct: 77 G 77
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -2
Query: 764 GWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGG 624
G GG G GG G G GG G G GG C G GG
Sbjct: 46 GGNTGGSGFG-GGNTGGSGFGGGKTGGSGFG-----GGNTCGSGFGG 86
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -2
Query: 785 GXWGS*RGWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXG 606
G G G GG G GG+ G G GG G G GG GG G G
Sbjct: 19 GSGGGFGGGNNGGSGFG-GGKNGGTGFGGGNTGGSGFG-GGNTGGSGFGGGKTGGSGFGG 76
Query: 605 G 603
G
Sbjct: 77 G 77
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -2
Query: 764 GWRXGGXRXGVGGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGG 624
G GG G GG G G GG G G GG C G GG
Sbjct: 46 GGNTGGSGFG-GGNTGGSGFGGGKTGGSGFG-----GGNTCGSGFGG 86
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 589 QVAQTPPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
Q A PP P P S P P+ P P P P
Sbjct: 55 QPAAAPPQQLEQPTPAPAPESAPAPVQCPEPTPEVPQQP 93
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 598 QTPPXXXRSPPXPPXQXSPPXPLLVPXPXPP 690
+ PP R PP PP P +P P P
Sbjct: 690 EAPPLTTRPPPVTVRNTRPPPPPQIPQPRSP 720
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
PP PP PP PP P P PP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
PP PP PP PP P P PP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
PP PP PP PP P P PP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
PP PP PP PP P P PP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 598 QTPPXXXRSPPXPPXQXSPPXPLLVPXPXPP 690
+ PP R PP PP P +P P P
Sbjct: 690 EAPPLTTRPPPVTVRNTRPPPPPQIPQPRSP 720
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = -2
Query: 731 GGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGGV 600
GGRG GG G G G R G GG GG GG GG+
Sbjct: 262 GGRGGRGGRG-----GFRGGFRGGRGG---FGGPGGPMGGRGGM 297
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = -2
Query: 731 GGRGXXGGXGXXXXGGXGXGTRRGXGGEXCXGGXGGERXXXGGV 600
GGRG GG G G G R G GG GG GG GG+
Sbjct: 262 GGRGGRGGRG-----GFRGGFRGGRGG---FGGPGGPMGGRGGM 297
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
PP PP PP PP P P PP P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 604 PPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
PP PP PP PP P P PP P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 607 PXXXRSPPXPPXQXSPPXPLLVPXPXPP 690
P +PP PP PP P P PP
Sbjct: 119 PGGVPAPPNPPRTCCPPPTPAAPPPPPP 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,054,438
Number of Sequences: 27780
Number of extensions: 228330
Number of successful extensions: 2967
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2501
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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