Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_F18
         (963 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    25   0.77 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   1.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.1  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   5.4  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   7.2  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   7.2  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 931 PXXPXPPPPPP 963
           P  P PPPPPP
Sbjct: 338 PPKPAPPPPPP 348


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 12/37 (32%), Positives = 13/37 (35%)
 Frame = +1

Query: 595 AQTPPXXXRSPPXPPXQXSPPXPLLVPXPXPPXXXXP 705
           A  P       P  P + SPP P   P P  P    P
Sbjct: 20  APGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 940  PXPPPPPP 963
            P PPPPPP
Sbjct: 1355 PPPPPPPP 1362


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 940  PXPPPPPP 963
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = +1

Query: 601 TPPXXXRSPPXPPXQXSPPXPLLVPXPXPP 690
           T P   R    P  +     P+ +P P PP
Sbjct: 27  TRPARLRREAKPEAEPGNNRPIYIPQPRPP 56


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = +1

Query: 601 TPPXXXRSPPXPPXQXSPPXPLLVPXPXPP 690
           T P   R    P  +     P+ +P P PP
Sbjct: 26  TRPTRLRREAKPEAEPGNNRPVYIPQPRPP 55


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = +1

Query: 601 TPPXXXRSPPXPPXQXSPPXPLLVPXPXPP 690
           T P   R    P  +     P+ +P P PP
Sbjct: 27  TRPTRLRREAEPEAEPGNNRPVYIPQPRPP 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,983
Number of Sequences: 438
Number of extensions: 3143
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31686018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)