Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F17
(945 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 30 0.41
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.72
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.7
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 1.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 3.5
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 27 5.1
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 27 5.1
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 26 8.9
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 30.3 bits (65), Expect = 0.41
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 420 NFLRYSLLPTASTRERGRLEVRSALGTVHVICTVVDRFV 304
NF ++P STR+R + +R G +H+IC D +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.72
Identities = 18/68 (26%), Positives = 18/68 (26%), Gaps = 3/68 (4%)
Frame = +2
Query: 725 PXXXPXXTPPXPPPXPXXXXXPGPRGXXPAXFP---XPXXXXPPPXXXXXPXXXXXXXPX 895
P P PP P P P P G P P P P P P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Query: 896 PXXPXXPP 919
P PP
Sbjct: 1192 PPPSEAPP 1199
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/63 (26%), Positives = 17/63 (26%), Gaps = 2/63 (3%)
Frame = +2
Query: 737 PXXTPPXPPPXPXXXXXPGPRGXXPAXFP--XPXXXXPPPXXXXXPXXXXXXXPXPXXPX 910
P PP P P P P G P P P P P P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 911 XPP 919
PP
Sbjct: 1120 APP 1122
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/62 (29%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Frame = +2
Query: 725 PXXXPXXTPPXPPPXPXXXXXPGPRGXXPAXFPXPXXXXPP-PXXXXXPXXXXXXXPXPX 901
P P PP P P P P G P P P PP P P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPV--PKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Query: 902 XP 907
P
Sbjct: 1171 VP 1172
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/66 (28%), Positives = 19/66 (28%), Gaps = 1/66 (1%)
Frame = +2
Query: 725 PXXXPXXTPPXPPPXPXXXXXPGPRGXXPAXFPXPXXXXPP-PXXXXXPXXXXXXXPXPX 901
P P PP P P P P P P P PP P P P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIP-PVPKPAAGVPPVPPPSEAPPVPKPSVGVP- 1208
Query: 902 XPXXPP 919
P PP
Sbjct: 1209 -PVPPP 1213
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +1
Query: 280 DYNPNG-NGYEPIDNGAYYVDRPQG---RPYFKPTPFPG 384
DYN N N Y PI N Y+++ G PYF PG
Sbjct: 119 DYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 752 PXPPPXPXXXXXPGPRGXXPAXFPXPXXXXPPPXXXXXPXXXXXXXPXPXXPXXP 916
P PPP P P P P P PPP P P P P P
Sbjct: 732 PPPPPPAVIVPTPAP-APIPVPPPAPIMGGPPP--PPPPPGVAGAGPPPPPPPPP 783
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 22.6 bits (46), Expect(2) = 3.5
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 725 PXXXPXXTPPXPPPXP 772
P TPP PPP P
Sbjct: 899 PTIITHPTPPPPPPLP 914
Score = 22.6 bits (46), Expect(2) = 3.5
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +2
Query: 749 PPXPPPXPXXXXXPGPRGXXPA 814
PP PPP P G + PA
Sbjct: 945 PPPPPPPPPLVSAAGGKFVSPA 966
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 187 SMTPXPFFAQPTVGNGYEP-IDNRPYIVNPPKDYNPNGNGYEPIDNGAY 330
S+ P P A + + P +++ PY+ N D+N NGN P+ +Y
Sbjct: 350 SVFPQPASAMKPMASPMLPNVNSMPYLSNG--DHNNNGNTSSPVSRFSY 396
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 306 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 413
R + ++C R P RP + PW + + K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 277 KDYNPNGNGYEPIDNGAYYVDRPQGRP 357
K Y +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,639,861
Number of Sequences: 5004
Number of extensions: 51966
Number of successful extensions: 163
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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