Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F16
(906 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom... 66 6e-12
SPAC977.16c |dak2||dihydroxyacetone kinase Dak2 |Schizosaccharom... 55 1e-08
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.52
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.52
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.1
SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces po... 27 2.8
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 2.8
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 4.8
SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase ... 26 6.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.5
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 8.5
>SPAC22A12.11 |dak1||dihydroxyacetone kinase
Dak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 66.1 bits (154), Expect = 6e-12
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = +2
Query: 173 PETCVDDNLRGVVAVYPQLQLHPKHRVITIRRQDDSMRVAILGGGGSGHEPFASGFIGSG 352
PE V D L+ + + L +H + + I + V+++ GGG+GHEP S F+G G
Sbjct: 9 PEVLVLDGLKSLADMNKTLTVHEEGKFIYFHDYNKK-NVSVISGGGAGHEPTHSSFVGKG 67
Query: 353 MLDGAVAGGVFASPPTGHVLYGIAQL 430
ML AV+G +FASP + + GI Q+
Sbjct: 68 MLTAAVSGSIFASPSSKQIYTGIKQV 93
Score = 35.1 bits (77), Expect = 0.014
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 444 QGGVLVIIGNYTGDRLNFGXXXXXXXXXXXXVEXLIVGEDVASXKNKT---XGRSMVREV 614
+ G LVI NYTGD L+FG E + V +DV+ + K+ R + V
Sbjct: 96 EAGTLVICKNYTGDILHFGMALEKQRTAGKKAELIAVADDVSVGRKKSGKVGRRGLSGTV 155
Query: 615 LFISLXAPXALKTLP 659
L + A + LP
Sbjct: 156 LVHKIAGAAAARGLP 170
>SPAC977.16c |dak2||dihydroxyacetone kinase Dak2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 55.2 bits (127), Expect = 1e-08
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +2
Query: 245 HRVITIRRQDDSMRVAILGGGGSGHEPFASGFIGSGMLDGAVAGGVFASPPTGHV 409
+R + D +V ++ GGGSGHEP +GF+G G LD G +FASP T +
Sbjct: 37 YRTASAPGSGDLPKVTLVSGGGSGHEPTHAGFVGDGALDAVACGDIFASPSTKQI 91
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 450 GVLVIIGNYTGDRLNFGXXXXXXXXXXXXVEXLIVGEDVASXKNK 584
G L+I+ NYTGD ++FG VE + VG+DV+ K +
Sbjct: 103 GTLIIVKNYTGDIIHFGLAAERAKAAGMNVELVAVGDDVSVGKKR 147
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.52
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -1
Query: 450 PPELY--LCSCAIPYNTCPVGGEAKTPPATAPSSI-PEPMNPDANGSCPDPPPP 298
PPE L + A P P G +PP + P I P MNP N + P PP
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +1
Query: 712 PXXVPXRLAXLPPXPPPXXHISPXPXXXSAL--VXPAXPAXPXXPXXXP 852
P +P PP PP P P A + PA PA P P P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 378 PPATAPSSIPEPMNPDANGSCPDPPPPRMA 289
P + A SIP P P S P PPPPR A
Sbjct: 343 PRSNAAGSIPLP--PQGR-SAPPPPPPRSA 369
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -1
Query: 417 PYNTCPVGGEAKTPPATAPSSIPEPMNPDANGSCPDPPPP 298
P + P PP PSS AN P PPPP
Sbjct: 277 PVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -1
Query: 402 PVGGEAKTPPATAPSSIPEPMNPDANGSCPDP-PPPRMATL 283
P A P + PSS P P + P P PPP T+
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTV 264
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 378 PPATAPSSIPEPMNPDANGSCPDPPPP 298
PP+ P N +N S P PPPP
Sbjct: 316 PPSRRNRGKPPIGNGSSNSSLPPPPPP 342
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1
Query: 375 PATAPSSIPEPMNPDANGSCPDPPPPRMA 289
PA AP +P P P G P PPPP +A
Sbjct: 744 PAPAPIPVPPPA-PIMGGPPPPPPPPGVA 771
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 375 PATAPSSIPEPMNPDANGSCPDPPPP 298
P AP+ IP P G P PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 730 RLAXLPPXPPPXXHISPXPXXXSALVXPAXPAXPXXPXXXPP 855
+L P PPP I P P V P P P PP
Sbjct: 726 KLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -1
Query: 417 PYNTCPVGGEAKTPPATAPSSIPEPMNPDANGSCPDPPPP 298
P + P A TPP S P P P P PPP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 396 GGEAKTPPATAPSSIPEPMNPDANGSCPDPPPPRMA 289
GG A P + P P+ P S P PPPP M+
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQM-SAPTPPPPPMS 1713
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 423 AIPYNTCPVGGEAKTPP-ATAPSSIPEPMNPDANGSCPDPP--PP 298
A P +T PV ++ PP +AP+ P PM+ S P P PP
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/53 (28%), Positives = 18/53 (33%)
Frame = +1
Query: 709 HPXXVPXRLAXLPPXPPPXXHISPXPXXXSALVXPAXPAXPXXPXXXPPXXNP 867
HP P + PP +P P S P+ P P P PP P
Sbjct: 1685 HPVSTPP-VRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/58 (31%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = +1
Query: 721 VPXRLAXLPPXPPPXXHISPXPXXXSA--LVXPAXPAXP-XXPXXXPPXXNPXXAFXP 885
VP PP P P + P P A + P+ A P P PP P A P
Sbjct: 1094 VPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +1
Query: 721 VPXRLAXLPPXPPPXXHISPXPXXXSALVXPAXPAXPXXPXXXPPXXNPXXAFXPXXP 894
VP PP P P I P P +A V P P P PP P P P
Sbjct: 1161 VPKPSVAAPPVPAPSSGIPPVP-KPAAGVPPVPP-----PSEAPPVPKPSVGVPPVPP 1212
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 378 PPATAPSSIPEPMNPDANGSCPDPPP 301
PP APSS P+ A G P PPP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = +1
Query: 721 VPXRLAXLPPXPPPXXHISPXPXXXSA--LVXPAXPAXP-XXPXXXPPXXNPXXAFXP 885
VP + +PP P P + P P A + P+ P P PP P P
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 402 PVGGEAKTPPATAPSSIPEPMNPDANGSCPDPPPP 298
P+ + PP P+S P P+ P ++ P PPP
Sbjct: 1033 PIPVPSTAPPVPIPTSTP-PV-PKSSSGAPSAPPP 1065
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Frame = +1
Query: 745 PPXPPPXXHISPXPXXXSALVXPAXPAXPXXP---XXXPPXXNPXXAFXP 885
PP P P I P A PA P P PP P A P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP 1113
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 396 GGEAKTPPATAPSSIPEPMNPDANGSCPDPPPPR 295
G +A P AP SIP P+ S P PP+
Sbjct: 955 GRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPK 988
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = -1
Query: 420 IPYNTCPV-----GGEAKTPPATAPSSIPEPMNPDANGSCPDPPP 301
IP +T PV G + PP APSS P P +G+ P P P
Sbjct: 1045 IPTSTPPVPKSSSGAPSAPPPVPAPSS-EIPSIPAPSGAPPVPAP 1088
>SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 305 GGSGHEPFASGFIGSGMLDGAVAGGVFASPPTGHVLYGIA 424
G S H F+ L AVA G+ S PTG Y ++
Sbjct: 215 GLSPHMAVLKVFVNDKFLTEAVADGLIISTPTGSTAYSLS 254
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Frame = -1
Query: 381 TPPATAPSSIPEPMNPDANG-----SCPDPPPP 298
T A++PS+I +P P AN + P PPPP
Sbjct: 1068 TSAASSPSNISKPSAPVANNVSKPSAVPPPPPP 1100
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 375 PATAPSSIPEPMNPDANGSCPDPPPPRMATLILSSCL 265
P T SS P P+ N S P PPP L ++ L
Sbjct: 151 PGTVKSSA-SPFVPNQNPSAPPPPPQEYRQLNVTDAL 186
>SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase
Ade6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 552
Score = 26.2 bits (55), Expect = 6.4
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 248 RVITIRRQDDS--MRVAILGGGGSGHEPFASGFIGSGMLDGAVAGGVFASPPTGHVLYGI 421
R++T R S +RV I G GG+ H P GM+ V P G L G+
Sbjct: 428 RMVTYARTAASRGLRVIIAGAGGAAHLP--------GMVAAMTPLPVIGVPVKGSTLDGV 479
Query: 422 AQLH 433
LH
Sbjct: 480 DSLH 483
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 396 GGEAKTPPATAPSSIPEPMNPDANGSCP 313
GGEA P P+ IP P+ A + P
Sbjct: 882 GGEALAAPVAVPAPIPAPVAEPAPPAAP 909
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -1
Query: 402 PVGGEAKTPPATAPSSIPEPMNPDANGSCPDPPPP 298
P+G A PA P P P P + PPP
Sbjct: 712 PMGTGAVNSPAIKPQVTPAPPTPAPTPAVKHHPPP 746
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,057,884
Number of Sequences: 5004
Number of extensions: 60083
Number of successful extensions: 241
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -