Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F14
(885 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0400 - 22608519-22608844,22609044-22609122 35 0.100
03_01_0515 - 3864796-3865425 32 0.70
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.70
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 0.93
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 3.8
12_02_1174 - 26696869-26698191 29 5.0
08_01_0059 - 394001-394708 28 8.7
01_01_0224 - 1905978-1907084,1907489-1908070,1908653-1908667 28 8.7
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 34.7 bits (76), Expect = 0.100
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -2
Query: 818 GXGGXXXXXXGXXGGXXXGGGXXXXXXXXVXXXXXGGGGXXXXXFXXXGGXXXPPXRGXX 639
G GG G GG GGG GGGG GG PP G
Sbjct: 42 GGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGY 101
Query: 638 XPXG 627
P G
Sbjct: 102 YPPG 105
>03_01_0515 - 3864796-3865425
Length = 209
Score = 31.9 bits (69), Expect = 0.70
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +1
Query: 646 PLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPP 813
P G PP PPPP PPP PP P PP
Sbjct: 64 PAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPP 119
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/66 (24%), Positives = 17/66 (25%)
Frame = +3
Query: 615 PXXXXPGXXXPPXGGXXGPPXXXKXXXXXXPPPXXXXXNXXXXXXXXPPXPXXXPXXPXX 794
P P PP PP PPP + PP P P
Sbjct: 43 PTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPP 102
Query: 795 XXXPPP 812
PPP
Sbjct: 103 PPSPPP 108
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 703 PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PPPP T PPP P P PP P
Sbjct: 71 PPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPP 109
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +3
Query: 645 PPXGGXXGPPXXXKXXXXXXPPPXXXXXNXXXXXXXXPPXPXXXPXXPXXXXXPPP 812
PP G PP PPP PP P P PPP
Sbjct: 63 PPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPP 118
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +3
Query: 645 PPXGGXXGPPXXXKXXXXXXPPPXXXXXNXXXXXXXXPPXPXXXPXXPXXXXXPPP 812
P G PP PPP PP P P P PPP
Sbjct: 64 PAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPP 119
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.9 bits (69), Expect = 0.70
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 670 PPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PP PPPP PPP PP P PP P
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = +1
Query: 670 PPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXPXXFFXXPGXX 849
PP K PPPP PPP PP P PP P P
Sbjct: 316 PPPPKPAAAAPPPPP------PPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369
Query: 850 XXXXXXXXXPPP 885
PPP
Sbjct: 370 PGGKKGGPPPPP 381
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 670 PPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
P N PPPP PPP PP P PP P
Sbjct: 574 PLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPP 623
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 670 PPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PP N PPPP PPP PP P PP P
Sbjct: 609 PPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPP--PPSLPNRLVPPPPAP 656
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 670 PPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PP N PPPP PPP PP P PP P
Sbjct: 591 PPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPP--PPPLPNHSVLPPPPP 638
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 703 PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PPPP PPP PP P PP P
Sbjct: 567 PPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPP 605
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +1
Query: 670 PPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PP PPPP PPP PP P P P
Sbjct: 82 PPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQP 131
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/88 (26%), Positives = 24/88 (27%), Gaps = 2/88 (2%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXXPPPPXXXX--KTXXXXXXXXPPPXXXPPXXPXXXX 801
P P+ PP PPPP K PPP PP P
Sbjct: 167 PPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPP---- 222
Query: 802 XXPPXPXXFFXXPGXXXXXXXXXXXPPP 885
PP P PG PPP
Sbjct: 223 --PPPPTVPPRTPGDTPAVVEPKPQPPP 248
>08_01_0059 - 394001-394708
Length = 235
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/46 (28%), Positives = 14/46 (30%)
Frame = +1
Query: 703 PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXPXXFFXXP 840
PPPP PP PP P PP P + P
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPP 47
>01_01_0224 - 1905978-1907084,1907489-1908070,1908653-1908667
Length = 567
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 381 ILKLTSRLNNTSIYGVRFKDHFPIALAEPRTSIAGPA 271
+LKL R T+I V+ ++ FPI +T+I PA
Sbjct: 206 VLKLGRRTGGTAIRVVQVENSFPIGACINKTAIQNPA 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,631,545
Number of Sequences: 37544
Number of extensions: 383928
Number of successful extensions: 1201
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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