Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F14
(885 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97634-12|CAI95599.1| 195|Homo sapiens non-metastatic cells 4, ... 35 0.45
BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein. 30 9.7
BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif prote... 30 9.7
AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif prote... 30 9.7
AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif prote... 30 9.7
AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif prote... 30 9.7
AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif prote... 30 9.7
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 30 9.7
AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens ... 30 9.7
AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2 p... 30 9.7
AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein. 30 9.7
AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein. 30 9.7
>Z97634-12|CAI95599.1| 195|Homo sapiens non-metastatic cells 4,
protein expressed in protein.
Length = 195
Score = 34.7 bits (76), Expect = 0.45
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -2
Query: 293 GPRSPGPL*RCHHGCSCPFFQFS*RSSTWVREQRWSCSKPAPERRRRIGSL 141
GPR+PGP HG P R +W RE+ KP +RR +G +
Sbjct: 16 GPRAPGPSLLVRHGSGLPPSALK-RGPSWTRERTLVAVKPDGVQRRLVGDV 65
>BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein.
Length = 983
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 703 PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PPPP PPP PP P PP P
Sbjct: 347 PPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLP 385
>BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 703 PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PPPP PPP PP P PP P
Sbjct: 347 PPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLP 385
>AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 703 PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PPPP PPP PP P PP P
Sbjct: 347 PPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLP 385
>AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 703 PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PPPP PPP PP P PP P
Sbjct: 348 PPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLP 386
>AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 703 PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PPPP PPP PP P PP P
Sbjct: 347 PPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLP 385
>AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 703 PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PPPP PPP PP P PP P
Sbjct: 348 PPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLP 386
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/68 (27%), Positives = 19/68 (27%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXX 807
P PL PP PPPP P P PP P
Sbjct: 321 PVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAP--PNPGGPPPAPPPPGLAP 378
Query: 808 PPXPXXFF 831
PP P FF
Sbjct: 379 PPPPGLFF 386
>AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens
cDNA FLJ14550 fis, clone NT2RM2001696. ).
Length = 680
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 703 PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PPPP PPP PP P PP P
Sbjct: 44 PPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLP 82
>AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2
protein.
Length = 2715
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 670 PPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PP PPPP T PPP PP P PP P
Sbjct: 402 PPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPP---PPVSPPPLPSPPPPP 448
>AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.
Length = 2605
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 670 PPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PP PPPP T PPP PP P PP P
Sbjct: 292 PPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPP---PPVSPPPLPSPPPPP 338
>AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein.
Length = 2415
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 670 PPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXP 819
PP PPPP T PPP PP P PP P
Sbjct: 102 PPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPP---PPVSPPPLPSPPPPP 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,266,264
Number of Sequences: 237096
Number of extensions: 2021143
Number of successful extensions: 4878
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4144
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -