Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F14
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.27
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.27
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.27
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.47
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.47
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.5
AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family ... 29 3.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/80 (25%), Positives = 21/80 (26%)
Frame = +1
Query: 646 PLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXPXX 825
P+ GG PP PPPP PPP P PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 826 FFXXPGXXXXXXXXXXXPPP 885
P PPP
Sbjct: 768 CPPPPPPPPPGGFKGGPPPP 787
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXX 807
P G P+ GG PP PPPP PPP P P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--FKGGPPPPPPPGMFAPMAPVIPDYL 804
Query: 808 PP 813
PP
Sbjct: 805 PP 806
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXX--PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXX 801
P G P+ GG PP PPPP PPP PP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP-------GGCPPPPPPPPPGGFKGG 783
Query: 802 XXPPXPXXFF 831
PP P F
Sbjct: 784 PPPPPPPGMF 793
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/80 (23%), Positives = 19/80 (23%)
Frame = +3
Query: 645 PPXGGXXGPPXXXKXXXXXXPPPXXXXXNXXXXXXXXPPXPXXXPXXPXXXXXPPPXXXX 824
P GG PP PPP PP P P PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 825 FFXXPRXXXXXXXXXXXPPP 884
P PPP
Sbjct: 768 CPPPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/76 (27%), Positives = 22/76 (28%), Gaps = 5/76 (6%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXK-----NXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPX 792
P P+ GG PP PPPP PPP PP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP- 773
Query: 793 XXXXXPPXPXXFFXXP 840
PP P F P
Sbjct: 774 -----PPPPGGFKGGP 784
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/80 (25%), Positives = 21/80 (26%)
Frame = +1
Query: 646 PLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXPXX 825
P+ GG PP PPPP PPP P PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 826 FFXXPGXXXXXXXXXXXPPP 885
P PPP
Sbjct: 768 CPPPPPPPPPGGFKGGPPPP 787
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXX 807
P G P+ GG PP PPPP PPP P P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--FKGGPPPPPPPGMFAPMAPVIPDYL 804
Query: 808 PP 813
PP
Sbjct: 805 PP 806
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXX--PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXX 801
P G P+ GG PP PPPP PPP PP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP-------GGCPPPPPPPPPGGFKGG 783
Query: 802 XXPPXPXXFF 831
PP P F
Sbjct: 784 PPPPPPPGMF 793
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/80 (23%), Positives = 19/80 (23%)
Frame = +3
Query: 645 PPXGGXXGPPXXXKXXXXXXPPPXXXXXNXXXXXXXXPPXPXXXPXXPXXXXXPPPXXXX 824
P GG PP PPP PP P P PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 825 FFXXPRXXXXXXXXXXXPPP 884
P PPP
Sbjct: 768 CPPPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/76 (27%), Positives = 22/76 (28%), Gaps = 5/76 (6%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXK-----NXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPX 792
P P+ GG PP PPPP PPP PP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP- 773
Query: 793 XXXXXPPXPXXFFXXP 840
PP P F P
Sbjct: 774 -----PPPPGGFKGGP 784
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/80 (25%), Positives = 21/80 (26%)
Frame = +1
Query: 646 PLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXXPPXPXX 825
P+ GG PP PPPP PPP P PP P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 826 FFXXPGXXXXXXXXXXXPPP 885
P PPP
Sbjct: 351 CPPPPPPPPPGGFKGGPPPP 370
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXX 807
P G P+ GG PP PPPP PPP P P
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--FKGGPPPPPPPGMFAPMAPVIPDYL 387
Query: 808 PP 813
PP
Sbjct: 388 PP 389
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXX--PPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXX 801
P G P+ GG PP PPPP PPP PP
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP-------GGCPPPPPPPPPGGFKGG 366
Query: 802 XXPPXPXXFF 831
PP P F
Sbjct: 367 PPPPPPPGMF 376
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/80 (23%), Positives = 19/80 (23%)
Frame = +3
Query: 645 PPXGGXXGPPXXXKXXXXXXPPPXXXXXNXXXXXXXXPPXPXXXPXXPXXXXXPPPXXXX 824
P GG PP PPP PP P P PPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 825 FFXXPRXXXXXXXXXXXPPP 884
P PPP
Sbjct: 351 CPPPPPPPPPGGFKGGPPPP 370
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/76 (27%), Positives = 22/76 (28%), Gaps = 5/76 (6%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXK-----NXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPX 792
P P+ GG PP PPPP PPP PP P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP- 356
Query: 793 XXXXXPPXPXXFFXXP 840
PP P F P
Sbjct: 357 -----PPPPGGFKGGP 367
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXX 807
P P GG PP PPP PPP PP P
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI 381
Query: 808 PPXP 819
PP P
Sbjct: 382 PPPP 385
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/67 (26%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +1
Query: 646 PLXGGXXXPPXXKNXXXXXPPPPXXXXKT-XXXXXXXXPPPXXXPPXXPXXXXXXPPXPX 822
P G PP + PPPP +T PPP P PP P
Sbjct: 279 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
Query: 823 XFFXXPG 843
PG
Sbjct: 339 PGMRYPG 345
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXX 807
P P GG PP PPP PPP PP P
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI 391
Query: 808 PPXP 819
PP P
Sbjct: 392 PPPP 395
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/67 (26%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +1
Query: 646 PLXGGXXXPPXXKNXXXXXPPPPXXXXKT-XXXXXXXXPPPXXXPPXXPXXXXXXPPXPX 822
P G PP + PPPP +T PPP P PP P
Sbjct: 289 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
Query: 823 XFFXXPG 843
PG
Sbjct: 349 PGMRYPG 355
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXX 807
P PL G PP PPPP PPP P P
Sbjct: 242 PPKGSPPLAGSGSPPPPPA---AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 808 PPXP 819
PP P
Sbjct: 299 PPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXX 807
P PL G PP PPPP PPP P P
Sbjct: 263 PPKGSPPLAGSGSPPPPPA---AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 808 PPXP 819
PP P
Sbjct: 320 PPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 628 PXGXXXPLXGGXXXPPXXKNXXXXXPPPPXXXXKTXXXXXXXXPPPXXXPPXXPXXXXXX 807
P PL G PP PPPP PPP P P
Sbjct: 248 PPKGSPPLAGSGSPPPPPA---AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 808 PPXP 819
PP P
Sbjct: 305 PPPP 308
>AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family
protein 31 protein.
Length = 747
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 384 YILKLTSRLNNTSIYGVRFKDHFPIALAEPRTSIAGPALTMP 259
++L L+ L S Y + K HFP TS+ GPA+ +P
Sbjct: 612 HLLNLSHHLCRFSEYNLFVKAHFPRGSYGSLTSMTGPAVEIP 653
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,404,658
Number of Sequences: 27780
Number of extensions: 286708
Number of successful extensions: 851
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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