Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_F10
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0513 - 16681227-16683936,16685572-16685966                       30   2.9  
01_01_0340 + 2727135-2727205,2727470-2727639,2728418-2728506,272...    29   6.6  

>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 266  QQGLLHKHESLXKFHDDVQGRIPSQEFGILDLL 364
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>01_01_0340 +
           2727135-2727205,2727470-2727639,2728418-2728506,
           2729017-2729070,2729310-2729380,2729504-2729585,
           2729678-2729774,2729902-2729972
          Length = 234

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 10/147 (6%)
 Frame = +3

Query: 93  RGLLPSPLSSTVPE-----FKTTPVDAAFVEKQKKI----LSLFYNVNEISYEAEYYKVA 245
           RGL+ SP+SST+P+     F T  +  +F E Q  I    L + + + E++    +Y + 
Sbjct: 80  RGLVRSPVSSTLPQITGRLFITWGILWSFPETQSYIFVTSLLICWCIIEVT-RYSFYGMK 138

Query: 246 QDFNIEASKDCYTNMKAYXNFMMMYKVGFLPK-NLEFSIFYXKMREEAIALFKLFYYAKD 422
           + F    S   +     Y  F+  + VG + +  L +++       E   L     +   
Sbjct: 139 ESFGFTPS---WLLWLRYSTFIACFPVGVVSEICLAYTVLPFMKASEKYCLRMPNKWNFS 195

Query: 423 FECFYKTACYARVYMNQAMFLYXYYIA 503
           F  FY    +   Y+    +L+ + IA
Sbjct: 196 FNYFYANVFFMAFYVPVVPYLFHHMIA 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,229,643
Number of Sequences: 37544
Number of extensions: 312574
Number of successful extensions: 593
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)