Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F07
(944 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.074
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.074
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.074
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 34 0.17
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 33 0.39
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.52
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.52
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.52
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 32 0.69
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 32 0.69
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 32 0.69
U63557-1|AAC47301.1| 558|Caenorhabditis elegans transmembrane r... 31 1.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.2
AC024201-1|AAF36028.1| 558|Caenorhabditis elegans Abnormal cell... 31 1.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.6
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 31 1.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.1
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 2.1
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 2.1
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 30 2.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.8
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 29 4.8
AL117205-2|CAB55164.1| 169|Caenorhabditis elegans Hypothetical ... 29 4.8
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 29 4.8
AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical ... 29 4.8
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 29 6.4
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 29 6.4
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 29 6.4
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 29 6.4
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 6.4
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 29 6.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.4
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 29 6.4
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 29 6.4
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 29 6.4
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 29 6.4
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 29 6.4
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 29 6.4
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z81059-5|CAJ15164.1| 176|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z81059-3|CAB02927.1| 246|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z81059-2|CAB02926.1| 240|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z81059-1|CAB02925.1| 249|Caenorhabditis elegans Hypothetical pr... 28 8.5
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 28 8.5
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 28 8.5
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 28 8.5
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 28 8.5
AL132948-10|CAC51066.1| 366|Caenorhabditis elegans Hypothetical... 28 8.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 8.5
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 8.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 8.5
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 28 8.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 8.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 8.5
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.074
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 461 PPTXXPXSPP--XXPXPPXSXSPPPXXPP 541
PPT P PP P PP + SPPP PP
Sbjct: 275 PPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPP-----XXPXPPXSXSPPPXXPP 541
P P +PP SPP P PP + SPPP PP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP--PP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.074
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 461 PPTXXPXSPP--XXPXPPXSXSPPPXXPP 541
PPT P PP P PP + SPPP PP
Sbjct: 296 PPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPP-----XXPXPPXSXSPPPXXPP 541
P P +PP SPP P PP + SPPP PP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP--PP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.074
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 461 PPTXXPXSPP--XXPXPPXSXSPPPXXPP 541
PPT P PP P PP + SPPP PP
Sbjct: 281 PPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPP-----XXPXPPXSXSPPPXXPP 541
P P +PP SPP P PP + SPPP PP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP--PP 282
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 458 TPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
TPP+ PP P PP S PP PP
Sbjct: 786 TPPSTSSVPPPPPPLPPISSGAPPPPPP 813
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 458 TPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
TPP+ PP P PP S PP PP
Sbjct: 786 TPPSTSSVPPPPPPLPPISSGAPPPPPP 813
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2
Query: 416 PXFLQSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPP 526
P SP P TPP+ P +PP P P PP
Sbjct: 160 PPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 428 QSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXPPXXR 550
++SP P SPP P P +PPP PP R
Sbjct: 119 EASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRR 159
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 476 PXSPPXXPXPPXSXSPPPXXPP 541
P PP P P SPPP PP
Sbjct: 140 PPPPPRVPRTPPPRSPPPRRPP 161
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 389 SXCSXCSIMPXFLQSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPP 529
S C C++ L P+ + PP P P P PP PPP
Sbjct: 230 SSCGGCNMGCSCLPPPPSPVCMPPPPPPCPMPIPCPPPPPACSCPPP 276
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 383 KPSXCSXCSIMPXFLQSSPTXXPLXTPPTXXPXSPPXXPXPPXS 514
K + S ++ FLQ + PL T P P +PP P PP S
Sbjct: 799 KSAPASLQALDTFFLQYASNSQPLSTLPPPPPPNPPPAPQPPSS 842
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.52
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPPXXPXPPXSXS-PPPXXPPXXR 550
P+ P+ P P P P PP S PPP PP R
Sbjct: 268 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGR 306
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +2
Query: 413 MPXFLQSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXP 538
MP + +P P PP PP P PP PP P
Sbjct: 273 MPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP 314
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 461 PPTXXPXSPPXXPXPPXSXSPPPXXPP 541
PP+ P PP P P + PPP PP
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPP--PP 291
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.3 bits (70), Expect = 0.52
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 404 CSIMPXFLQSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXP 538
C+ P P P PP PP P PP PPP P
Sbjct: 38 CAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 461 PPTXXPXSPPXXPXPPXSXSPPPXXPP 541
PP P PP PP PPP PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPP 53
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 449 PLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
PL PP P PP PP PPP PP
Sbjct: 42 PLPCPPP--PICPPQFCPPPPMCPPPPPPPP 70
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 449 PLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
P PP +PP P PP PP PP
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPP 58
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
P P PP P P P PP PPP PP
Sbjct: 44 PCPPPPICPPQFCPPPPMCPPPPP--PPPPPMCPP 76
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.52
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPPXXPXPPXSXS-PPPXXPPXXR 550
P+ P+ P P P P PP S PPP PP R
Sbjct: 278 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGR 316
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +2
Query: 413 MPXFLQSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXP 538
MP + +P P PP PP P PP PP P
Sbjct: 283 MPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP 324
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 461 PPTXXPXSPPXXPXPPXSXSPPPXXPP 541
PP+ P PP P P + PPP PP
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPP--PP 301
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 31.9 bits (69), Expect = 0.69
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 461 PPTXXPXSPPXXPXPPXSXSPPP 529
PP P PP P PP + +PPP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPP 24
Score = 31.5 bits (68), Expect = 0.91
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +2
Query: 383 KPSXCSXCSIMPXFLQSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPP 526
KPS S S SS P PP P S P P PP + P
Sbjct: 136 KPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPTPPPPPPAQQKP 183
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 31.9 bits (69), Expect = 0.69
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 461 PPTXXPXSPPXXPXPPXSXSPPP 529
PP P PP P PP + +PPP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPP 24
Score = 31.5 bits (68), Expect = 0.91
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +2
Query: 383 KPSXCSXCSIMPXFLQSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPP 526
KPS S S SS P PP P S P P PP + P
Sbjct: 136 KPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPTPPPPPPAQQKP 183
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.69
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -2
Query: 595 GXXARGXXRGXGXXXAXAXGXXGGGGXRXRRXRXXRGAXRXXGWGGXQGXXGRG 434
G G G G G GGGG R R G G+GG G G G
Sbjct: 213 GGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYG 266
>U63557-1|AAC47301.1| 558|Caenorhabditis elegans transmembrane
receptor LIN-17 protein.
Length = 558
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 395 CSXCSIMPXFLQSSPTXXPLXTPPTXXPXSPP 490
C CS P P+ PL PPT P PP
Sbjct: 508 CGMCSSAPVKNPIEPSTRPLLEPPTAPPPQPP 539
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 449 PLXTPPTXXPXSPPXXPXPPXSXSPPPXXPPXXR 550
P P P PP P PP P P PP R
Sbjct: 234 PSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRR 267
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 428 QSSPTXXPLXTPPTXXPXS-PPXXPXPPXSXSPPPXXPPXXR 550
+ SP+ P P P PP P PP P P PP R
Sbjct: 237 EPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRR 278
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
P P P PP P PP PPP PP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
>AC024201-1|AAF36028.1| 558|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform a protein.
Length = 558
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 395 CSXCSIMPXFLQSSPTXXPLXTPPTXXPXSPP 490
C CS P P+ PL PPT P PP
Sbjct: 508 CGMCSSAPVKNPIEPSTRPLLEPPTAPPPQPP 539
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPPXXPX--PPXSXSPPPXXPP 541
P P PP PP P PP S PPP PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Frame = +2
Query: 449 PLXTPPTXXPX---SPPXXPXPPXSXSPPPXXPP 541
P PP P PP P PP PPP PP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +2
Query: 365 TKK*XXKPSXCSXCSIMPXFLQSSPTXXPLXTPPTXX-PXSPPXXPXPPXSXSPPPXXPP 541
TK PS + S + P P P T P PP PP + PPP PP
Sbjct: 689 TKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP 748
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 449 PLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
P PP P PP P PPP PP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPPXXPX--PPXSXSPPPXXPP 541
P P PP PP P PP S PPP PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Frame = +2
Query: 449 PLXTPPTXXPX---SPPXXPXPPXSXSPPPXXPP 541
P PP P PP P PP PPP PP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +2
Query: 365 TKK*XXKPSXCSXCSIMPXFLQSSPTXXPLXTPPTXX-PXSPPXXPXPPXSXSPPPXXPP 541
TK PS + S + P P P T P PP PP + PPP PP
Sbjct: 689 TKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP 748
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 449 PLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
P PP P PP P PPP PP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPPXXPX--PPXSXSPPPXXPP 541
P P PP PP P PP S PPP PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Frame = +2
Query: 449 PLXTPPTXXPX---SPPXXPXPPXSXSPPPXXPP 541
P PP P PP P PP PPP PP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +2
Query: 365 TKK*XXKPSXCSXCSIMPXFLQSSPTXXPLXTPPTXX-PXSPPXXPXPPXSXSPPPXXPP 541
TK PS + S + P P P T P PP PP + PPP PP
Sbjct: 272 TKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP 331
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 449 PLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
P PP P PP P PPP PP
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +2
Query: 389 SXCSXCSIMPXFLQSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPP 529
S C S P F+ P PPT P +PP PP SP P
Sbjct: 561 STCFIASSRPFFVNYPLHARP---PPTPAPITPPKSQSPPALPSPSP 604
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXS--PPXXPXPPXSXSPPPXXPP 541
P P P P PP P PP PPP PP
Sbjct: 114 PAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPP 150
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXP 538
P P P P PP P PP PPP P
Sbjct: 123 PAPAPYQQQPPPPPP-PPHYPPPPPHYPPPPPAP 155
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
PT P PP +PP P PP P PP
Sbjct: 69 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPP 103
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = +2
Query: 437 PTXXPLXTPPTXX-PXSPPXXPX---PPXSXSPPPXXP 538
P PL PP P PP P PP SPPP P
Sbjct: 77 PPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
PT P PP +PP P PP P PP
Sbjct: 291 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPP 325
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = +2
Query: 437 PTXXPLXTPPTXX-PXSPPXXPX---PPXSXSPPPXXP 538
P PL PP P PP P PP SPPP P
Sbjct: 299 PPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 336
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 440 TXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
T P P P PP P P S P P PP
Sbjct: 254 TPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPP 287
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 461 PPTXXPXSPPXXPXPPXSXSPPPXXP 538
PP P +PP P PP PPP P
Sbjct: 349 PPIISPPAPPPPPPPPP-PPPPPQTP 373
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = +2
Query: 416 PXFLQSSPTXXPLXTPP--TXXPX--SPPXXPXPPXSXSPPPXXPP 541
P ++ P+ P TP T P SPP P PP PPP PP
Sbjct: 327 PPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPP--PPPPPPPPP 370
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 421 ISPIVPYQXPPXXPPNLXXSXPPXTPSXS 507
I PI+ PP PP PP TPS S
Sbjct: 348 IPPIISPPAPPPPPPPPPPPPPPQTPSAS 376
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/49 (28%), Positives = 17/49 (34%)
Frame = +2
Query: 395 CSXCSIMPXFLQSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
C P ++P P+ P P P PP PPP PP
Sbjct: 30 CPTPMCQPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPP 78
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 461 PPTXXPXSPPXXPXPPXSXSPPPXXPP 541
PP PP P P PPP PP
Sbjct: 243 PPIYPGLGPPALPLSPMPQGPPPNIPP 269
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 431 SSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXP 538
+SP+ P T P+ S P P PP PPP P
Sbjct: 300 ASPSVSPASTSPSGPAPSIP-PPRPPALAPPPPVAP 334
>AL117205-2|CAB55164.1| 169|Caenorhabditis elegans Hypothetical
protein Y116A8A.2 protein.
Length = 169
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 90 SGAYCPRLSASTVPEFKTTPVDAAFVEKQKKIL 188
S + P + +T+PE+++ P A E KKI+
Sbjct: 29 SAPHFPPIKRNTIPEYQSVPPGAVITEPAKKII 61
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 461 PPTXXPXSPPXXPXPPXSXSPPPXXPP 541
PP PP P P PPP PP
Sbjct: 243 PPIYPGLGPPALPLSPMPQGPPPNIPP 269
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 431 SSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXP 538
+SP+ P T P+ S P P PP PPP P
Sbjct: 300 ASPSVSPASTSPSGPAPSIP-PPRPPALAPPPPVAP 334
>AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical
protein Y32G9B.1 protein.
Length = 394
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 425 LQSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
L++S P PP+ P PP P + PP PP
Sbjct: 82 LEASGASTPPTPPPSTFPTLPPLTFGTPSTPPPPATLPP 120
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 437 PTXXPLXTPPTXXPXSPPXXPXP-PXSXSPPPXXP 538
P P PP P SP P P P PPP P
Sbjct: 82 PYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAP 116
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +2
Query: 434 SPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
SP+ P P P PP P S P P PP
Sbjct: 77 SPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPP 112
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 404 CSIMPXFLQSSPTXXP----LXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
C P F QS+P+ P + PPT P P P +PPP P
Sbjct: 1062 CLFNP-FTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAPPPPPRP 1110
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 404 CSIMPXFLQSSPTXXP----LXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
C P F QS+P+ P + PPT P P P +PPP P
Sbjct: 1056 CLFNP-FTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAPPPPPRP 1104
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 434 SPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXP 538
+PT P PT PP P PP PPP P
Sbjct: 226 APTLAPFRPRPTTRRLPPPTTPPPP----PPPPAP 256
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 434 SPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXP 538
+PT P PT PP P PP PPP P
Sbjct: 224 APTLAPFRPRPTTRRLPPPTTPPPP----PPPPAP 254
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 540 GGXXGGGEXXXGGXGXXGGLXG 475
GG GGG GG G GGL G
Sbjct: 75 GGGRGGGRGGNGGFGDNGGLRG 96
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical
protein F41F3.8 protein.
Length = 118
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 449 PLXTPPTXXPXSPPXXPXPPXSXSPPP 529
P P P PP P PP PPP
Sbjct: 41 PRVAAPPFAPPPPPSPPLPPKCECPPP 67
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +3
Query: 432 RPLPXXPXXPPQPXXLXAPRXXLXLLXLXPPPPXXPXAXAXXXPXPRXXPRAXXPA 599
+P P P P P +P+ PPPP P A P P P PA
Sbjct: 471 KPAPPPPSRIPNPSP--SPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPA 524
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +2
Query: 416 PXFLQSSP--TXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXP 538
P + ++P T P PP+ P P S SPPP P
Sbjct: 459 PSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 404 CSIMPXFLQSSPTXXP----LXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
C P F QS+P+ P + PPT P P P +PPP P
Sbjct: 1062 CLFNP-FTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAPPPPPRP 1110
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 404 CSIMPXFLQSSPTXXP----LXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
C P F QS+P+ P + PPT P P P +PPP P
Sbjct: 1056 CLFNP-FTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAPPPPPRP 1104
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 404 CSIMPXFLQSSPTXXP----LXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
C P F QS+P+ P + PPT P P P +PPP P
Sbjct: 1056 CLFNP-FTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAPPPPPRP 1104
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 404 CSIMPXFLQSSPTXXP----LXTPPTXXPXSPPXXPXPPXSXSPPPXXPP 541
C P F QS+P+ P + PPT P P P +PPP P
Sbjct: 1062 CLFNP-FTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAPPPPPRP 1110
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 476 PXSPPXXPXPPXSXSPPPXXPP 541
P SP P PP PPP PP
Sbjct: 782 PPSPLTAPIPPPPPPPPPMLPP 803
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 476 PXSPPXXPXPPXSXSPPPXXPP 541
P SP P PP PPP PP
Sbjct: 681 PPSPLTAPIPPPPPPPPPMLPP 702
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 407 SIMPXFLQSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPPXXPPXXR 550
S P + SP P PP P S P P PP + PP R
Sbjct: 479 SPQPAEVSKSPPPPP-PLPPIATPSSVPPPPPPPPALEQEISGPPTVR 525
>Z81059-5|CAJ15164.1| 176|Caenorhabditis elegans Hypothetical
protein F11F1.8 protein.
Length = 176
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3
Query: 540 GGXXGGGEXXXGGXGXXGGLXGXXXXXXXXXXXXGDDWRNXGIIEQ 403
GG GGGE GG GGL G G+D GII Q
Sbjct: 35 GGILGGGEGGLGGILGNGGLGGILGGNGLGGVLGGEDGGLGGIIGQ 80
>Z81059-3|CAB02927.1| 246|Caenorhabditis elegans Hypothetical
protein F11F1.5 protein.
Length = 246
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3
Query: 540 GGXXGGGEXXXGGXGXXGGLXGXXXXXXXXXXXXGDDWRNXGIIEQ 403
GG GGGE GG GGL G G+D GII Q
Sbjct: 35 GGILGGGEGGLGGILGNGGLGGILGGNGLGGILGGEDGGLGGIIGQ 80
>Z81059-2|CAB02926.1| 240|Caenorhabditis elegans Hypothetical
protein F11F1.4 protein.
Length = 240
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3
Query: 540 GGXXGGGEXXXGGXGXXGGLXGXXXXXXXXXXXXGDDWRNXGIIEQ 403
GG GGGE GG GGL G G+D GII Q
Sbjct: 29 GGILGGGEGGLGGILGNGGLGGILGGNGLGGVLGGEDGGLGGIIGQ 74
>Z81059-1|CAB02925.1| 249|Caenorhabditis elegans Hypothetical
protein F11F1.2 protein.
Length = 249
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3
Query: 540 GGXXGGGEXXXGGXGXXGGLXGXXXXXXXXXXXXGDDWRNXGIIEQ 403
GG GGGE GG GGL G G+D GII Q
Sbjct: 35 GGILGGGEGGLGGILGNGGLGGILGGNGLGGVLGGEDGGLGGIIGQ 80
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 488 PXXPXPPXSXSPPPXXPP 541
P P PP SPPP PP
Sbjct: 147 PPRPPPPVELSPPPRPPP 164
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 488 PXXPXPPXSXSPPPXXPP 541
P P PP SPPP PP
Sbjct: 788 PPRPPPPVELSPPPRPPP 805
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 488 PXXPXPPXSXSPPPXXPP 541
P P PP SPPP PP
Sbjct: 788 PPRPPPPVELSPPPRPPP 805
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 488 PXXPXPPXSXSPPPXXPP 541
P P PP SPPP PP
Sbjct: 788 PPRPPPPVELSPPPRPPP 805
>AL132948-10|CAC51066.1| 366|Caenorhabditis elegans Hypothetical
protein Y39B6A.11 protein.
Length = 366
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 407 SIMPXFLQSSPTXXPLXTPPTXXPXSPPXXPXPPXSXSPPP 529
+++P LQ +P P+ PPT P PP + PP
Sbjct: 240 TVVPPVLQEAP---PVIAPPTEPVAPPTSTQAPPIAAQAPP 277
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -2
Query: 580 GXXRGXGXXXAXAXGXXGGGGXRXRRXRXXRGAXRXXGWGGXQGXXGRGR 431
G RG G GGGG G GWGG G G GR
Sbjct: 93 GGGRGGGGRGDWGGNNNGGGG------NWGGGGNNDGGWGGNNGGGGGGR 136
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +2
Query: 428 QSSPTXXPLXTPP--TXXPXSPPXXPXPPXSXSPPPXXPPXXR 550
+ SP P PP P P P P +PPP P R
Sbjct: 539 EPSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAKPR 581
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 438 LPXXPXXPPQPXXLXAPRXXLXLLXLXPPPPXXPXAXAXXXPXPRXXPRA 587
+P P PP P AP + PPPP P P P P A
Sbjct: 211 IPQAPPAPPPPIGGIAP---VNAHGAPPPPPLPPVGAGAPPPPPPPPPPA 257
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 398 SXCSIMPXFLQSSPTXXPLXTPPTXXPXSPPXXPXPP 508
S S+ SSP+ P +PP P PP P PP
Sbjct: 300 SRISLASTSASSSPSD-PCPSPPLLPPVCPPAPPPPP 335
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 461 PPTXXPXSPPXXPXPPXSXSPPPXXPP 541
PP P PP P P PP PP
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPPQGIPP 734
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 438 LPXXPXXPPQPXXLXAPRXXLXLLXLXPPPPXXPXAXAXXXPXPRXXPRA 587
+P P PP P AP + PPPP P P P P A
Sbjct: 197 IPQAPPAPPPPIGGIAP---VNAHGAPPPPPLPPVGAGAPPPPPPPPPPA 243
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 438 LPXXPXXPPQPXXLXAPRXXLXLLXLXPPPPXXPXAXAXXXPXPRXXPRA 587
+P P PP P AP + PPPP P P P P A
Sbjct: 197 IPQAPPAPPPPIGGIAP---VNAHGAPPPPPLPPVGAGAPPPPPPPPPPA 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,505,208
Number of Sequences: 27780
Number of extensions: 176943
Number of successful extensions: 2015
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1586
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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