Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F06
(948 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 116 6e-27
SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces po... 114 1e-26
SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomy... 32 0.14
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 1.7
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 28 1.7
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 8.9
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 26 8.9
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 116 bits (278), Expect = 6e-27
Identities = 65/131 (49%), Positives = 85/131 (64%), Gaps = 2/131 (1%)
Frame = +3
Query: 159 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVXARRSS 338
MS +E V AKLAEQAERY++M MK+V + +LS EERNLLSVAYKN++ ARR+S
Sbjct: 1 MSNSRENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRAS 60
Query: 339 WRVISSIEQKTE--GSERKQQMAKXYRVKVQKXLREIXYXXLGLLDKPP*FLXLXIQKVX 512
WR+ISSIEQK E G+ R+ + K YR K++ L +I + L +L+K +
Sbjct: 61 WRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHL-IPAATTGESK 119
Query: 513 CFTLKMKGDYY 545
F KMKGDYY
Sbjct: 120 VFYYKMKGDYY 130
>SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 114 bits (275), Expect = 1e-26
Identities = 73/181 (40%), Positives = 99/181 (54%), Gaps = 2/181 (1%)
Frame = +3
Query: 162 SVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVXARRSSW 341
+ +E+ V AKLAEQAERY+ M MK V T EL+ EERNLLSVAYKNV+ ARR+SW
Sbjct: 3 TTSREDAVYLAKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRASW 62
Query: 342 RVISSIEQKTE--GSERKQQMAKXYRVKVQKXLREIXYXXLGLLDKPP*FLXLXIQKVXC 515
R++SSIEQK E G+ + ++ K YR K+++ L I L +L+K +
Sbjct: 63 RIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHL-IPNAASAESKV 121
Query: 516 FTLKMKGDYYXVPCXSGHXXXQTFCCTRXPDXXPXSF*NPXTAKMXPTHPPXRSGPGVKF 695
F KMKGDYY + + + + TA++ PTH P R G + F
Sbjct: 122 FYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAAS-EIATAELAPTH-PIRLGLALNF 179
Query: 696 S 698
S
Sbjct: 180 S 180
>SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +3
Query: 162 SVDKEELVQRAKLAEQAERYDDMAAAMKEVT--ETGVELSNEERN-LLSVAYKNVVXARR 332
SV + ++ K ++ E + ++ + +K V+ ET E+SN+E N LL + YK V
Sbjct: 3 SVSNVSVNEQGKFNDKEEGFSNLKS-LKHVSHSETDFEVSNDEDNQLLELGYKPVFKREF 61
Query: 333 SSWRVIS 353
S+W S
Sbjct: 62 STWATFS 68
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 663 PPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
PP PG P + P + + PPP H P PP P
Sbjct: 210 PPMHHKPGEHMPPPPMHHE----PGEHMPPPPMHHEPGEHMPPPP 250
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 663 PPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
PP PG P + P + + PPP H P PP P
Sbjct: 223 PPMHHEPGEHMPPPPMHHE----PGEHMPPPPMHHEPGEHMPPPP 263
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 663 PPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
PP PG P + P + + PPP H P PP P
Sbjct: 236 PPMHHEPGEHMPPPPMHHE----PGEHMPPPPMHHEPGEHMPPPP 276
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 663 PPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
PP PG P + P + + PPP H P PP P
Sbjct: 249 PPMHHEPGEHMPPPPMHHE----PGEHMPPPPMHHEPGEHMPPPP 289
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 663 PPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
PP PG P + P + + PPP H P PP P
Sbjct: 262 PPMHHEPGEHMPPPPMHHE----PGEHMPPPPMHHEPGEHMPPPP 302
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 663 PPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
PP PG P + P + + PPP H P PP P
Sbjct: 275 PPMHHEPGEHMPPPPMHHE----PGEHMPPPPMHHEPGEHMPPPP 315
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 663 PPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
PP PG P + P + + PPP H P PP P
Sbjct: 288 PPMHHEPGEHMPPPPMHHE----PGEHMPPPPMHHEPGEHMPPPP 328
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 663 PPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
PP PG P + P + + PPP H P PP P
Sbjct: 301 PPMHHEPGEHMPPPPMHHE----PGEHMPPPPMHHEPGEHMPPPP 341
Score = 26.6 bits (56), Expect = 5.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 732 PXQXLSPPPXHXXPXPPXPPXP 797
P + + PPP H P PP P
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPP 224
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 28.3 bits (60), Expect = 1.7
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +3
Query: 135 ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKN 314
I S+ S S EEL+ R + + Y+ MA + E E ++ + LLS Y N
Sbjct: 2998 IMSITMSDSSAYGEELM-RERFEHLLKAYEKMALMVAEQEEFNAKIEDMALKLLSEKYDN 3056
Query: 315 VVXARRSSWRVISSIEQ 365
+R+ + +E+
Sbjct: 3057 EAYQAELFYRLSNCVEK 3073
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 8.9
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 648 MXPTHPPXRSGPGVK-FSPVLLXXRYXTPPXQXLS-PPPXHXXPXPPXPP 791
M P HP S P V+ S TPP +S PPP P P PP
Sbjct: 1681 MAPAHPV--STPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +3
Query: 645 KMXPTHPPXRSG--PGVKFSPVLLXXRYXTPPXQXLSPPPXH 764
KM P G PG K S + R+ T +SPPP H
Sbjct: 1021 KMAQGAKPGEGGELPGNKVSESIAKTRHSTAGVGLISPPPHH 1062
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,775,145
Number of Sequences: 5004
Number of extensions: 48744
Number of successful extensions: 167
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 483319012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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