Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F06
(948 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 182 3e-46
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 182 3e-46
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 173 1e-43
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 173 2e-43
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 1.4
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.9
U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachme... 29 6.4
U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachme... 29 6.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.4
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 28 8.5
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 8.5
AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical ... 28 8.5
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 8.5
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 182 bits (443), Expect = 3e-46
Identities = 108/182 (59%), Positives = 119/182 (65%), Gaps = 2/182 (1%)
Frame = +3
Query: 159 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVXARRSS 338
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVV ARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
Query: 339 WRVISSIEQKTEGSERKQQMAKXYRVKVQKXLREIXYXXLGLLDKPP*FL--XLXIQKVX 512
WRVISSIEQKTEGSE+KQQMAK YR KV+K LR+I L LLDK FL +
Sbjct: 61 WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDK---FLIPKAGAAESK 117
Query: 513 CFTLKMKGDYYXVPCXSGHXXXQTFCCTRXPDXXPXSF*NPXTAKMXPTHPPXRSGPGVK 692
F LKMKGDYY + + +F + KM PTH P R G +
Sbjct: 118 VFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAF-DIAKDKMQPTH-PIRLGLALN 175
Query: 693 FS 698
FS
Sbjct: 176 FS 177
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 182 bits (443), Expect = 3e-46
Identities = 108/182 (59%), Positives = 119/182 (65%), Gaps = 2/182 (1%)
Frame = +3
Query: 159 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVXARRSS 338
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVV ARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
Query: 339 WRVISSIEQKTEGSERKQQMAKXYRVKVQKXLREIXYXXLGLLDKPP*FL--XLXIQKVX 512
WRVISSIEQKTEGSE+KQQMAK YR KV+K LR+I L LLDK FL +
Sbjct: 61 WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDK---FLIPKAGAAESK 117
Query: 513 CFTLKMKGDYYXVPCXSGHXXXQTFCCTRXPDXXPXSF*NPXTAKMXPTHPPXRSGPGVK 692
F LKMKGDYY + + +F + KM PTH P R G +
Sbjct: 118 VFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAF-DIAKDKMQPTH-PIRLGLALN 175
Query: 693 FS 698
FS
Sbjct: 176 FS 177
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 173 bits (422), Expect = 1e-43
Identities = 95/131 (72%), Positives = 104/131 (79%), Gaps = 2/131 (1%)
Frame = +3
Query: 159 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVXARRSS 338
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVV ARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
Query: 339 WRVISSIEQKTEGSERKQQMAKXYRVKVQKXLREIXYXXLGLLDKPP*FLXL--XIQKVX 512
WRVISSIEQKTEGSE+KQQ+AK YRVKV++ L +I L LLD+ FL + +
Sbjct: 61 WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDE---FLIVKAGAAESK 117
Query: 513 CFTLKMKGDYY 545
F LKMKGDYY
Sbjct: 118 AFYLKMKGDYY 128
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 173 bits (421), Expect = 2e-43
Identities = 95/131 (72%), Positives = 104/131 (79%), Gaps = 2/131 (1%)
Frame = +3
Query: 159 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVXARRSS 338
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVV ARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
Query: 339 WRVISSIEQKTEGSERKQQMAKXYRVKVQKXLREIXYXXLGLLDKPP*FLXL--XIQKVX 512
WRVISSIEQKTEGSE+KQQ+AK YRVKV++ L +I L LLD+ FL + +
Sbjct: 61 WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDE---FLIVKAGAAESK 117
Query: 513 CFTLKMKGDYY 545
F LKMKGDYY
Sbjct: 118 VFYLKMKGDYY 128
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 28.7 bits (61), Expect(2) = 1.4
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 630 NPXTAKMXPTHPPXRS-GPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPP 791
+P T HPP S G + P + Y P ++ PP P PP PP
Sbjct: 134 HPATPSYYIQHPPPPSMSNGAPYYPHMNPSPYYQPRPNYVTQPPAPIIP-PPQPP 187
Score = 20.6 bits (41), Expect(2) = 1.4
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 771 PXPPXPPXPHXAT 809
P PP PP P T
Sbjct: 204 PPPPKPPMPDLRT 216
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +3
Query: 633 PXTAKMXPTHPPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPP 791
P T + P PP + P + + + P +PPP P PP PP
Sbjct: 318 PTTFILPPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPP 370
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 729 PPXQXLSPPPXHXXPXPPXPPXPHXA 806
PP PPP H PP PP PH A
Sbjct: 136 PPPPHYPPPPPHY---PPPPPAPHSA 158
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 750 PPPXHXXPXPPXPPXPHXATH 812
PPP H P PP P P A H
Sbjct: 136 PPPPHYPPPPPHYPPPPPAPH 156
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -3
Query: 799 CGXGGXGGXGXXWXGGGDRXCXGGVXYLXXKRTGENLTPGPERXGGCVG 653
CG GG GG G GGG C GG G P GGC G
Sbjct: 155 CGGGGGGGCG----GGGGGGCGGG------SSGGGGYAVAPSGGGGCGG 193
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 799 CGXGGXGGXGXXWXGGGDRXCXGG 728
CG GG G G GGG C GG
Sbjct: 90 CGGGGGGCGGGGGCGGGGGGCGGG 113
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 799 CGXGGXGGXGXXWXGGGDRXCXGG 728
CG GG G G GGG C GG
Sbjct: 97 CGGGGGCGGGGGGCGGGGGGCGGG 120
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 796 GXGGXGGXGXXWXGGGDRXCXGG 728
G GG GG G GGG C GG
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGG 142
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 799 CGXGGXG-GXGXXWXGGGDRXCXGG 728
CG GG G G G GGG C GG
Sbjct: 103 CGGGGGGCGGGGGGCGGGGGGCGGG 127
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 799 CGXGGXG-GXGXXWXGGGDRXCXGG 728
CG GG G G G GGG C GG
Sbjct: 110 CGGGGGGCGGGGGGCGGGGGGCGGG 134
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -3
Query: 799 CGXGGXGGXGXXWXGGGDRXCXGGVXYLXXKRTGENLTPGPERXGGCVG 653
CG GG GG G GGG C GG G P GGC G
Sbjct: 155 CGGGGGGGCG----GGGGGGCGGG------SSGGGGYAVAPSGGGGCGG 193
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 799 CGXGGXGGXGXXWXGGGDRXCXGG 728
CG GG G G GGG C GG
Sbjct: 90 CGGGGGGCGGGGGCGGGGGGCGGG 113
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 799 CGXGGXGGXGXXWXGGGDRXCXGG 728
CG GG G G GGG C GG
Sbjct: 97 CGGGGGCGGGGGGCGGGGGGCGGG 120
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 796 GXGGXGGXGXXWXGGGDRXCXGG 728
G GG GG G GGG C GG
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGG 142
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 799 CGXGGXG-GXGXXWXGGGDRXCXGG 728
CG GG G G G GGG C GG
Sbjct: 103 CGGGGGGCGGGGGGCGGGGGGCGGG 127
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 799 CGXGGXG-GXGXXWXGGGDRXCXGG 728
CG GG G G G GGG C GG
Sbjct: 110 CGGGGGGCGGGGGGCGGGGGGCGGG 134
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 654 PTHPPXRSGPGVKFSPV-LLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
P PP + P + P + ++ PP PPP P P PP P
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = +3
Query: 633 PXTAKMXPTHPPXRSGPGVKFSPVLLXXRYXTPPXQXLSP--PPXHXXPXPPXPPXPHXA 806
P T K P PP P SP PP L P P P PP PP P A
Sbjct: 467 PTTPK--PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPA 524
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = +3
Query: 663 PPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
PP + + +P + PP PP H P PP P P
Sbjct: 102 PPPQGADTWRGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFP 146
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 799 CGXGGXGGXGXXWXGGGDRXCXGG 728
CG GG G G GGG C GG
Sbjct: 72 CGGGGGGCGGGGGCGGGGGGCGGG 95
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 799 CGXGGXGGXGXXWXGGGDRXCXGG 728
CG GG G G GGG C GG
Sbjct: 79 CGGGGGCGGGGGGCGGGGGGCGGG 102
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 799 CGXGGXGGXGXXWXGGGDRXCXGG 728
CG G GG G GGG C GG
Sbjct: 129 CGGGCGGGGGGGCGGGGGGGCGGG 152
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 796 GXGGXGGXGXXWXGGGDRXCXGG 728
G GG GG G GGG C GG
Sbjct: 137 GGGGCGGGGGGGCGGGGGGCGGG 159
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 796 GXGGXGGXGXXWXGGGDRXCXGG 728
G GG GG G GGG C GG
Sbjct: 159 GGGGCGGGGGGCGGGGGGGCGGG 181
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 799 CGXGGXGGXGXXWXGGGDRXCXGG 728
CG GG GG G GGG C GG
Sbjct: 122 CGGGG-GGCGGGCGGGGGGGCGGG 144
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 799 CGXGGXG-GXGXXWXGGGDRXCXGG 728
CG GG G G G GGG C GG
Sbjct: 149 CGGGGGGCGGGGGGCGGGGGGCGGG 173
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 799 CGXGGXGGXGXXWXGGGDRXCXGG 728
CG GG GG G GGG GG
Sbjct: 116 CGGGGGGGCGGGGGGGGGGYASGG 139
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 799 CGXGGXGGXGXXWXGGGDRXCXGG 728
CG GG GG G GGG C GG
Sbjct: 90 CGGGGCGGGGGGCGGGG--GCGGG 111
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 799 CGXGGXG-GXGXXWXGGGDRXCXGG 728
CG GG G G G GGG C GG
Sbjct: 95 CGGGGGGCGGGGGCGGGGGGGCGGG 119
>U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform a protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 663 PPXRSGPGVK-FSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPP 791
P PG K F+P+ + R PP L P P P P PP
Sbjct: 40 PLITPNPGAKQFAPIHVPGR--EPPRMLLPPTPHFQAPFSPHPP 81
>U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform b protein.
Length = 315
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 663 PPXRSGPGVK-FSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPP 791
P PG K F+P+ + R PP L P P P P PP
Sbjct: 46 PLITPNPGAKQFAPIHVPGR--EPPRMLLPPTPHFQAPFSPHPP 87
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 654 PTHPPXRSGPGVKFSPVLLXXRYXTPPX-QXLSPPPXHXXPXPPXPP 791
P PP R P SP R TPP + +PP P PP PP
Sbjct: 152 PRSPPPRRPPMTPPSPQRRPPR--TPPSPEPRNPPRTPPSPIPPPPP 196
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 663 PPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
PP GP P L PP PPP P PP PP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPP---PPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 663 PPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
PP GP P L PP PPP P PP PP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPP---PPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 663 PPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPXPPXPPXP 797
PP GP P L PP PPP P PP PP P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPP---PPPPGGCPPPPPPPPP 360
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +3
Query: 699 PVLLXXRYX-TPPXQXLSPPPXHXXPXPPXPPXP 797
P L+ Y +PP P H P PP PP P
Sbjct: 934 PALILPEYHPSPPVPPPIPAIRHRTPSPPPPPLP 967
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +3
Query: 654 PTHPPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPX-PPXPPXPHXA 806
P P PG P + + T P + +PPP P PP PP P A
Sbjct: 115 PGKPGKPGRPGAPGQPGV-PGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGA 165
>AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical
protein Y76B12C.6 protein.
Length = 487
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 262 ASNLATRRGTSFQLLIRMSXVPDGHHGVSFP 354
A ++TR G Q + +PD HH +FP
Sbjct: 111 AERISTRFGVELQSFLPQEVLPDEHHPSNFP 141
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +3
Query: 654 PTHPPXRSGPGVKFSPVLLXXRYXTPPXQXLSPPPXHXXPX-PPXPPXPHXA 806
P P PG P + + T P + +PPP P PP PP P A
Sbjct: 115 PGKPGKPGRPGAPGQPGV-PGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGA 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,936,700
Number of Sequences: 27780
Number of extensions: 314795
Number of successful extensions: 1624
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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