BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F05
(968 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 0.78
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 24 2.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 24 2.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 24 2.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 24 2.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 24 2.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 24 2.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 24 2.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 24 2.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 24 2.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 24 2.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 24 2.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 2.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 24 2.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 24 2.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 24 2.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 24 2.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 5.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 5.5
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 22 7.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 9.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 9.6
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.4 bits (53), Expect = 0.78
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 738 PXXXAPPXSPPPXXPXXPPXXXXPXXXRXPPPPPRPP 848
P AP P P P P PPP PP
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52
Score = 24.2 bits (50), Expect = 1.8
Identities = 13/52 (25%), Positives = 16/52 (30%)
Frame = +2
Query: 743 LXRPSXLPXPXXPXRPPPPXXPXXXPXSPPPPXAANXXXPXXFPXXPPXXPP 898
+ + S P P P P P PP + P P PP P
Sbjct: 9 ITQQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 100 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 143
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 100 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 143
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 100 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 143
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 100 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 143
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 100 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 143
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 100 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 143
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 100 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 143
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 349 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 392
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 349 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 392
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 349 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 392
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 349 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 392
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 349 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 392
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 349 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 392
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 348 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 391
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 333 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 376
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 756 PXSPPPXXPXXPPXXXXPXXXRXPPPPPRPPXXXXPXXSRXXPP 887
P P P P P P P PP P R PP
Sbjct: 349 PPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPP 392
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 3.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 914 PPXPPPPP 937
PP PPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.0 bits (47), Expect = 4.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 825 PPPPPRPP 848
PPPPP PP
Sbjct: 1355 PPPPPPPP 1362
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 5.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 187 SPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTF 83
+PGIPP FL+ TT + L +G I F
Sbjct: 1498 APGIPPAATFLSPNSTTLVLRLHVWPDNGCPILYF 1532
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 5.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 187 SPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTF 83
+PGIPP FL+ TT + L +G I F
Sbjct: 1494 APGIPPAATFLSPNSTTLVLRLHVWPDNGCPILYF 1528
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 22.2 bits (45), Expect = 7.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -2
Query: 196 GRFSPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTF 83
GRF P E FLT +L E+R+ IFTF
Sbjct: 186 GRFVP-----EGFLTSCSFDYLTDTNEIRIFVATIFTF 218
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 9.6
Identities = 12/46 (26%), Positives = 13/46 (28%)
Frame = +1
Query: 751 PLPPPXPXXXPPXPPXXXXXXXPXXPPPPXGRQXXXPPXXPXXTPP 888
P+P P P PP P R P P PP
Sbjct: 337 PIPVPVPIYCGNFPPRPMGPWISMQEQIPRFRYIGPPTPFPRFIPP 382
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 9.6
Identities = 12/46 (26%), Positives = 13/46 (28%)
Frame = +1
Query: 751 PLPPPXPXXXPPXPPXXXXXXXPXXPPPPXGRQXXXPPXXPXXTPP 888
P+P P P PP P R P P PP
Sbjct: 343 PVPVPVPIHCGNFPPRPMGPWISIQEQVPRFRYIGPPTPFPRFIPP 388
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,318
Number of Sequences: 438
Number of extensions: 8570
Number of successful extensions: 62
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31927896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -