Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F04
(1025 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.001
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 38 0.002
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 37 0.005
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.016
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.61
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.80
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.4
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.4
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 4.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 5.7
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 9.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.7 bits (86), Expect = 0.001
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 545 PPPXPXXXPPPPXXPXQXXPPPPPPP 622
P P P P PP P PPPPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 34.3 bits (75), Expect = 0.028
Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Frame = +2
Query: 545 PPPXPXXX--PPPPXXP--XQXXPPPPPPP 622
PPP P PPPP P PPPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 34.3 bits (75), Expect(2) = 0.004
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 548 PPXPXXXPPPPXXPXQXXPPPPPPP 622
PP P PPPP PPPPPPP
Sbjct: 761 PPPP---PPPPGVAGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 332 PXPXKKKXXXXXGXXPPPXFXXXGGKXPPPPP 427
P P G PPP G PPPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 21.8 bits (44), Expect(2) = 0.004
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +2
Query: 329 PPXPXKKKXXXXXGXXPPPXFXXXGGKXPPPPP 427
PP P P P G PPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 545 PPPXPXXXPPPPXXPXQXXPPPPPPP 622
PP P PPPP PPPPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 9.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 377 PPPXFXXXGGKXPPPPP 427
PPP F PPPPP
Sbjct: 14 PPPGFEPPSQPPPPPPP 30
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.7 bits (81), Expect = 0.005
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +2
Query: 545 PPPXPXXXPPPPXXPXQXXPPP--PPPP 622
PPP P PPPP P PP PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 545 PPPXPXXXPPPPXXPXQXXPPPPPPP 622
PP PPPP P PPP PP
Sbjct: 1699 PPQMSAPTPPPP--PMSVPPPPSAPP 1722
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 545 PPPXPXXXPPPPXXPXQXXPPPPPPP 622
P P P P P PPPPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPP 1711
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 3/29 (10%)
Frame = +2
Query: 545 PPPXPXXXPPPPXXPXQXXPPP---PPPP 622
PP P PP PPP PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.016
Identities = 22/78 (28%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Frame = +2
Query: 407 KXPPPPPXKXXAXXXXXXXXXXXXPPP---KKXXXSPPLXXXFFFFXFXPPPXPXXXPPP 577
K P PPP + PPP ++ PP+ PPP P
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA 348
Query: 578 ---PXXPXQXXPPPPPPP 622
P P PPPPPP
Sbjct: 349 GSIPLPPQGRSAPPPPPP 366
Score = 30.7 bits (66), Expect = 0.35
Identities = 30/114 (26%), Positives = 33/114 (28%), Gaps = 4/114 (3%)
Frame = +2
Query: 293 GXXPXXGGGXXGPPXPXKKKXXXXXGXXPPPXFXXXGGKXPPPPPXKXXAXXXXXXXXXX 472
G P G PP P + G PPP PP PP
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPST-GRQPPPLSSSRAVSNPPAPPPAIPG------RSAP 401
Query: 473 XXPP--PKKXXXSPPLXXXFFFFXFXPPPXPXXXPP--PPXXPXQXXPPPPPPP 622
PP +PP+ PP P PP PP P PP PP
Sbjct: 402 ALPPLGNASRTSTPPVPTP----PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Frame = +2
Query: 548 PPXPXXXP-PPPXXPXQXXPPPPPPP 622
PP P P PP P PPP P P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 26.2 bits (55), Expect = 7.5
Identities = 20/74 (27%), Positives = 22/74 (29%), Gaps = 6/74 (8%)
Frame = +2
Query: 413 PPPPPXKXXAXXXXXXXXXXXXPPPKKXXXSPPLXXXFFFFXFXPPP------XPXXXPP 574
PPPPP A PPP +P PPP P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR-------QPPPLSSSRAVSNPPAP 391
Query: 575 PPXXPXQXXPPPPP 616
PP P + P PP
Sbjct: 392 PPAIPGRSAPALPP 405
Score = 25.8 bits (54), Expect = 9.9
Identities = 22/81 (27%), Positives = 26/81 (32%), Gaps = 11/81 (13%)
Frame = +2
Query: 413 PPPPPX-----KXXAXXXXXXXXXXXXPPPKKXXXSPPLXXXFFFFXFXPPPXPXXXP-- 571
PPPPP K PPP + + + PPP P P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 572 ---PPPXXPXQXXP-PPPPPP 622
PPP + PP PPP
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPP 393
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.61
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Frame = +2
Query: 545 PPPX---PXXXPPPPXXPXQXXPPPPPPP 622
PPP P P P PPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 26.6 bits (56), Expect = 5.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 548 PPXPXXXPPPPXXPXQXXPPPPPP 619
P P P P PPPPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 3/20 (15%)
Frame = +2
Query: 572 PPPXXPXQXXP---PPPPPP 622
PP P Q P PPPPPP
Sbjct: 224 PPTYTPKQADPLPAPPPPPP 243
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 0.80
Identities = 30/114 (26%), Positives = 33/114 (28%), Gaps = 12/114 (10%)
Frame = +2
Query: 317 GXXGPPXPXKKKXXXXXGXXPPPXFXXXGGKXPPPP----PXKXXAXXXXXXXXXXXXPP 484
G PP P K PPP G PPPP P + PP
Sbjct: 204 GEHMPPPPMHHKPGEHM--PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 261
Query: 485 P----KKXXXSPPLXXXFFFFXFXPPPXPXXXP----PPPXXPXQXXPPPPPPP 622
P + PP PPP P PPP + PPPP
Sbjct: 262 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 27.9 bits (59), Expect = 2.4
Identities = 25/94 (26%), Positives = 28/94 (29%), Gaps = 12/94 (12%)
Frame = +2
Query: 377 PPPXFXXXGGKXPPPP----PXKXXAXXXXXXXXXXXXPPP----KKXXXSPPLXXXFFF 532
PPP G PPPP P + PPP + PP
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 294
Query: 533 FXFXPPPXPXXXP----PPPXXPXQXXPPPPPPP 622
PPP P PPP + PPPP
Sbjct: 295 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 27.9 bits (59), Expect = 2.4
Identities = 25/94 (26%), Positives = 28/94 (29%), Gaps = 12/94 (12%)
Frame = +2
Query: 377 PPPXFXXXGGKXPPPP----PXKXXAXXXXXXXXXXXXPPP----KKXXXSPPLXXXFFF 532
PPP G PPPP P + PPP + PP
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Query: 533 FXFXPPPXPXXXP----PPPXXPXQXXPPPPPPP 622
PPP P PPP + PPPP
Sbjct: 308 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGGG 544
GGG GG G GG G G GGG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGG 471
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = -3
Query: 618 GGGGGGXXCXGXXGGGGXXXGXGGGXXKKKKKXXXRGGXXXFFXGGGXXXXGKK 457
GG GG G GG G GG + + RGG G G G K
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 165 GXDXGGXXGXRGGXXGGXRGG 103
G GG G RGG GG RGG
Sbjct: 26 GGFGGGRGGARGGGRGGARGG 46
Score = 25.8 bits (54), Expect = 9.9
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXG-GGGXXXGXGGGXXKKKKKXXXRGGXXXFFXGGGXXXXGKK 457
G GG G G G GGG GGG + RGG G G K
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 545 PPPXPXXXPPPPXXPXQXXPPPPPP 619
PP P PP P PP PPP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 545 PPPXPXXXPPPPXXPXQXXPPPPPP 619
P P P PP P PP PPP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 27.5 bits (58), Expect = 3.2
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = +2
Query: 419 PPPXKXXAXXXXXXXXXXXXPPPKKXXXSPPLXXXFFFFXFXPPPXPXXXPPPPXXPXQX 598
PP K A P PK PP+ P P P PP P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS---TAPPVPTPSAGLPPVPVPTAK 1235
Query: 599 XPPPPPP 619
PP P P
Sbjct: 1236 APPVPAP 1242
Score = 27.1 bits (57), Expect = 4.3
Identities = 20/80 (25%), Positives = 22/80 (27%)
Frame = +2
Query: 383 PXFXXXGGKXPPPPPXKXXAXXXXXXXXXXXXPPPKKXXXSPPLXXXFFFFXFXPPPXPX 562
P K PP P A P P +PP+ PPP P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTS---TPPVPKSSSGAPSAPPPVPA 1068
Query: 563 XXPPPPXXPXQXXPPPPPPP 622
P P PP P P
Sbjct: 1069 PSSEIPSIPAPSGAPPVPAP 1088
Score = 26.2 bits (55), Expect = 7.5
Identities = 19/74 (25%), Positives = 21/74 (28%), Gaps = 6/74 (8%)
Frame = +2
Query: 419 PPPXKXXAXXXXXXXXXXXXPPPKKXXXSPPLXXXFFFFXFXP------PPXPXXXPPPP 580
PP K P PK +PP+ P PP P PP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 581 XXPXQXXPPPPPPP 622
PP PPP
Sbjct: 1200 VPKPSVGVPPVPPP 1213
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGGG 544
G GGG G G G GG G GGG
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 27.1 bits (57), Expect = 4.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGGG 544
G GGG G G G GG G GGG
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGG 250
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 4.3
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = -3
Query: 618 GGGGGGXXCXGXXGGGGXXXGXGGGXXKKKKKXXXRGGXXXFFXG 484
GG GG G GG G GG + + RGG F G
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Score = 26.6 bits (56), Expect = 5.7
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -2
Query: 241 GGKXXPXXFXGGXPQKKKXNFRGGXGXGXRGXXGXXXGXXGGXEGRRKXGXK 86
GG+ GG N RGG G G RG G G GG G + G +
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRG--GFGGGSRGGSRGGFRGGSR 187
Score = 26.2 bits (55), Expect = 7.5
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGG-GGXXXGXGGGXXKKKKKXXXRGGXXXFFXGG 481
GG GG G GG GG G GG + RGG F GG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
Score = 26.2 bits (55), Expect = 7.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 165 GXDXGGXXGXRGGXXGGXRGG 103
G G G RGG GG RGG
Sbjct: 169 GFGGGSRGGSRGGFRGGSRGG 189
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 3/28 (10%)
Frame = +2
Query: 545 PPPXPXXXP---PPPXXPXQXXPPPPPP 619
PPP P P PP P PP PP
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 9.9
Identities = 16/67 (23%), Positives = 17/67 (25%)
Frame = +2
Query: 380 PPXFXXXGGKXPPPPPXKXXAXXXXXXXXXXXXPPPKKXXXSPPLXXXFFFFXFXPPPXP 559
PP PPP P PPP + PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 560 XXXPPPP 580
PPPP
Sbjct: 199 PKVPPPP 205
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,557,642
Number of Sequences: 5004
Number of extensions: 26023
Number of successful extensions: 426
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 535245848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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