BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_F04
(1025 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 35 0.003
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 33 0.014
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 33 0.018
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 32 0.024
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 30 0.13
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 29 0.17
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 29 0.17
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 27 0.69
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 27 0.69
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 25 2.8
AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeot... 25 3.7
AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein. 24 6.4
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 24 6.4
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 24 8.4
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 24 8.4
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 24 8.4
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 35.1 bits (77), Expect = 0.003
Identities = 24/75 (32%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Frame = +2
Query: 401 GGKXPPPPPXKXXAXXXXXXXXXXXXPPPKKXXXSP--PLXXXFFFFXFXPPPXPXXXPP 574
G PPPPP A PPP +P PL F P P PP
Sbjct: 526 GPLGPPPPPPPGGAVLNIPPQFL---PPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPP 582
Query: 575 PPXXPXQXXPPPPPP 619
P P PPP P
Sbjct: 583 PAPPPPPPMGPPPSP 597
Score = 23.8 bits (49), Expect = 8.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 602 PPPPPPP 622
PPPPPPP
Sbjct: 530 PPPPPPP 536
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 33.1 bits (72), Expect = 0.014
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = -3
Query: 618 GGGGGGXXCXGXXGGGGXXXGXGGGXXKKKKKXXXRGGXXXFFXGGGXXXXG 463
GGGGGG C G GGG + + RGG GGG G
Sbjct: 517 GGGGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGG 568
Score = 29.1 bits (62), Expect = 0.22
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 618 GGGGGGXXCXGXXGGGGXXXGXGGG 544
GGGG G G GG G GGG
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGG 864
Score = 28.3 bits (60), Expect = 0.39
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGG 547
GGGG GG G GG G GG
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGG 864
Score = 27.5 bits (58), Expect = 0.69
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXG 556
GGG GGG G GGGG G
Sbjct: 292 GGGVGGGGGGGGGGGGGGGSAG 313
Score = 25.8 bits (54), Expect = 2.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGGG 544
GGG GG G GG G G GGG
Sbjct: 672 GGGAVGGGS--GAGGGAGSSGGSGGG 695
Score = 25.4 bits (53), Expect = 2.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGGG 544
G G GG G GGGG GGG
Sbjct: 549 GAGRGGVGSGIGGGGGGGGGGRAGGG 574
Score = 25.4 bits (53), Expect = 2.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -3
Query: 618 GGGGGGXXCXGXXGGGGXXXGXGGGXXKKKKK 523
GG G G G GGGG G G +K++
Sbjct: 553 GGVGSGIGGGGGGGGGGRAGGGVGATGAEKQQ 584
Score = 25.4 bits (53), Expect = 2.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGG 568
GGGGGGG G G G
Sbjct: 562 GGGGGGGGRAGGGVGATG 579
Score = 25.4 bits (53), Expect = 2.8
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGG---GXXXGXGG 547
G G GGG G GGG G G GG
Sbjct: 679 GSGAGGGAGSSGGSGGGLASGSPYGGGG 706
Score = 23.8 bits (49), Expect = 8.4
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 6/32 (18%)
Frame = -3
Query: 621 GGGGGG------GXXCXGXXGGGGXXXGXGGG 544
GGG GG G G GGGG GGG
Sbjct: 841 GGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGG 872
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 32.7 bits (71), Expect = 0.018
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGGGXXKKKKKXXXR-----GGXXXFFXGGGXXXXGK 460
GGG GGG G GG G GGG + + R GG GGG G+
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQLDGR 262
Score = 27.5 bits (58), Expect = 0.69
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 618 GGGGGGXXCXGXXGGGGXXXGXGGG 544
G GGGG GGGG G G G
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPG 225
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 32.3 bits (70), Expect = 0.024
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGGG 544
GGGGGGG G G G G GGG
Sbjct: 656 GGGGGGGGGSVGSGGIGSSSLGGGGG 681
Score = 28.3 bits (60), Expect = 0.39
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGGG 544
GGGGGGG G G G G G
Sbjct: 658 GGGGGGGSVGSGGIGSSSLGGGGGSG 683
Score = 27.5 bits (58), Expect = 0.69
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXG 556
GGG GGG G GGGG G
Sbjct: 292 GGGVGGGGGGGGGGGGGGGSAG 313
Score = 24.6 bits (51), Expect = 4.8
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Frame = -3
Query: 621 GGGGG----GGXXCXGXXGGGGXXXGXGGG 544
GGGGG GG GGGG GG
Sbjct: 660 GGGGGSVGSGGIGSSSLGGGGGSGRSSSGG 689
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 29.9 bits (64), Expect = 0.13
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -3
Query: 618 GGGGGGXXCXGXXGGG-GXXXGXGGGXXKKKKKXXXRGGXXXFFXGGG 478
GG GGG G GGG G G GGG + + + GG F GGG
Sbjct: 55 GGYGGGDD--GYGGGGRGGRGGRGGGRGRGRGRGGRDGGGG--FGGGG 98
Score = 25.4 bits (53), Expect = 2.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGG 547
GGG G G G GGGG G G
Sbjct: 76 GGGRGRGRGRGGRDGGGGFGGGGYG 100
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 29.5 bits (63), Expect = 0.17
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGG 547
GGGGGGG G GGG GG
Sbjct: 553 GGGGGGGGGGGGGGVGGGIGLSLGG 577
Score = 29.1 bits (62), Expect = 0.22
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGGG 544
GGGGGGG G GG G G G
Sbjct: 555 GGGGGGGGGGGGVGGGIGLSLGGAAG 580
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 29.5 bits (63), Expect = 0.17
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGG 547
GGGGGGG G GGG GG
Sbjct: 554 GGGGGGGGGGGGGGVGGGIGLSLGG 578
Score = 29.1 bits (62), Expect = 0.22
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGGG 544
GGGGGGG G GG G G G
Sbjct: 556 GGGGGGGGGGGGVGGGIGLSLGGAAG 581
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 27.5 bits (58), Expect = 0.69
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXG 556
GGG GGG G GGGG G
Sbjct: 244 GGGVGGGGGGGGGGGGGGGSAG 265
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 27.5 bits (58), Expect = 0.69
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = -3
Query: 621 GGG----GGGGXXCXGXXGGGGXXXGXGGGXXKKKKK 523
GGG GGG C GGGG G GGG +K
Sbjct: 183 GGGELTTGGGTNGCT-KAGGGGGGTGTGGGLVSSSEK 218
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 25.4 bits (53), Expect = 2.8
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGG 568
GGGGGGG G GGGG
Sbjct: 547 GGGGGGG----GGGGGGG 560
Score = 25.0 bits (52), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXG 550
GGGGGGG GGGG G G
Sbjct: 548 GGGGGGG------GGGGGGVIGSG 565
>AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeotic
protein protein.
Length = 308
Score = 25.0 bits (52), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXG 550
GGG GGG G G GG G
Sbjct: 249 GGGTGGGTGGSGGAGSGGSSGNLG 272
>AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein.
Length = 304
Score = 24.2 bits (50), Expect = 6.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGGG 544
GG G G GGG G GGG
Sbjct: 234 GGAGNRGLGKMHHKAGGGGGGGAGGG 259
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 24.2 bits (50), Expect = 6.4
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 545 PPPXPXXXPPPPXXPXQXXPP 607
PPP PPP P PP
Sbjct: 110 PPPMMGMRPPPMMVPTMGMPP 130
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.8 bits (49), Expect = 8.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 602 PPPPPPP 622
PPPPPPP
Sbjct: 783 PPPPPPP 789
Score = 23.8 bits (49), Expect = 8.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 602 PPPPPPP 622
PPPPPPP
Sbjct: 784 PPPPPPP 790
Score = 23.8 bits (49), Expect = 8.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 602 PPPPPPP 622
PPPPPPP
Sbjct: 785 PPPPPPP 791
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 23.8 bits (49), Expect = 8.4
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 572 PPPXXPXQXXPPPPPPP 622
PPP Q PP PPP
Sbjct: 629 PPPSAYQQQQPPVVPPP 645
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.8 bits (49), Expect = 8.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 621 GGGGGGGXXCXGXXGGGGXXXGXGG 547
GG GG G GGGG G G
Sbjct: 1484 GGYGGSPTKGAGGGGGGGGGKGAAG 1508
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,849
Number of Sequences: 2352
Number of extensions: 10271
Number of successful extensions: 301
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 113463324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -