Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_F01
         (1012 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    28   0.12 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   5.8  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor protein.
          Length = 168

 Score = 28.3 bits (60), Expect = 0.12
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +2

Query: 911  PTPPXPXXXXPPHHPPXXXRPXSXLXPXXPXPRL 1012
            P PP P     P   P   RP     P  P PRL
Sbjct: 109  PRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRL 142



 Score = 27.5 bits (58), Expect = 0.20
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = +2

Query: 911  PTPPXPXXXXPPHHPPXXXRPXSXLXPXXPXPRL 1012
            P PP P     P   P   RP     P  P PR+
Sbjct: 135  PRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRI 168


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 649 AGGGXEXXXGGAGGXARXXGGGGGG 575
           AGG      GG+       GGGGGG
Sbjct: 27  AGGVVTGASGGSIVVGANNGGGGGG 51



 Score = 22.2 bits (45), Expect = 7.6
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = -1

Query: 649 AGGGXEXXXGGAGGXARXXGGGGGGGXG 566
           + GG      G         GGGGGG G
Sbjct: 26  SAGGVVTGASGGSIVVGANNGGGGGGLG 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,862
Number of Sequences: 438
Number of extensions: 2705
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33621042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)