Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_E23
         (933 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81130-12|CAB61027.1|  332|Caenorhabditis elegans Hypothetical p...   183   2e-46
Z79695-8|CAB01967.2|  332|Caenorhabditis elegans Hypothetical pr...   183   2e-46
Z49911-2|CAA90130.1|  681|Caenorhabditis elegans Hypothetical pr...    32   0.67 

>Z81130-12|CAB61027.1|  332|Caenorhabditis elegans Hypothetical
           protein F27D4.1 protein.
          Length = 332

 Score =  183 bits (445), Expect = 2e-46
 Identities = 94/191 (49%), Positives = 127/191 (66%), Gaps = 1/191 (0%)
 Frame = +2

Query: 179 LSAQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKAN 358
           L +   RL STLV+AEH+   L+P T N + AA K+G +VSVLV G      AE +AK N
Sbjct: 13  LISNASRLNSTLVVAEHDETKLAPITLNAITAASKLGNEVSVLVTGANATKVAEQVAKVN 72

Query: 359 GISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSP 538
           G+ +VLVA+ +  K    E + P+ILA+QKQF FT I A ++AFG+ V+PRVAAKLDVS 
Sbjct: 73  GVKRVLVAQDEKLKNNLPERVAPVILASQKQFNFTAITAGSSAFGRGVIPRVAAKLDVSS 132

Query: 539 ITDIIGIKDANTFVRTXYAGXAILTLEAKDPIKVITVRGTAF-PAXPLEGGSAXIDXAPE 715
           I+D+  +  A++F RT YAG A+  +++  PIK++T RGT+F PA   EGGS  ++ AP 
Sbjct: 133 ISDVTEVHSADSFTRTLYAGNAVKKVKSTAPIKLLTFRGTSFEPAK--EGGSGAVENAPS 190

Query: 716 GDYXTDLVXFL 748
            D  TDL  FL
Sbjct: 191 ADIKTDLSEFL 201


>Z79695-8|CAB01967.2|  332|Caenorhabditis elegans Hypothetical
           protein F27D4.1 protein.
          Length = 332

 Score =  183 bits (445), Expect = 2e-46
 Identities = 94/191 (49%), Positives = 127/191 (66%), Gaps = 1/191 (0%)
 Frame = +2

Query: 179 LSAQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKAN 358
           L +   RL STLV+AEH+   L+P T N + AA K+G +VSVLV G      AE +AK N
Sbjct: 13  LISNASRLNSTLVVAEHDETKLAPITLNAITAASKLGNEVSVLVTGANATKVAEQVAKVN 72

Query: 359 GISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSP 538
           G+ +VLVA+ +  K    E + P+ILA+QKQF FT I A ++AFG+ V+PRVAAKLDVS 
Sbjct: 73  GVKRVLVAQDEKLKNNLPERVAPVILASQKQFNFTAITAGSSAFGRGVIPRVAAKLDVSS 132

Query: 539 ITDIIGIKDANTFVRTXYAGXAILTLEAKDPIKVITVRGTAF-PAXPLEGGSAXIDXAPE 715
           I+D+  +  A++F RT YAG A+  +++  PIK++T RGT+F PA   EGGS  ++ AP 
Sbjct: 133 ISDVTEVHSADSFTRTLYAGNAVKKVKSTAPIKLLTFRGTSFEPAK--EGGSGAVENAPS 190

Query: 716 GDYXTDLVXFL 748
            D  TDL  FL
Sbjct: 191 ADIKTDLSEFL 201


>Z49911-2|CAA90130.1|  681|Caenorhabditis elegans Hypothetical
           protein M28.2 protein.
          Length = 681

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 23/93 (24%), Positives = 41/93 (44%)
 Frame = +2

Query: 110 IKTDFLNKILLIKMFAPNSRHLFLSAQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIG 289
           +K+     +  I+ F  N     +     R+  T V    +++    +T+ T N   K+ 
Sbjct: 200 VKSSTSQALAEIRSFIKNYAEDVIDGTTTRVGLTAV-NNFDSDAFKRSTEVTYNKGVKLI 258

Query: 290 GDVSVLVAGTKCGPAAESIAKANGISKVLVAES 388
           GD+  L    K GP   + A AN + KV++ +S
Sbjct: 259 GDLQTLQMSPKTGPDCRNTA-ANLLEKVIIIQS 290


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,532,892
Number of Sequences: 27780
Number of extensions: 332508
Number of successful extensions: 1021
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)