Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_E21
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443     38   0.015
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319     35   0.10 
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530...    35   0.10 
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205     33   0.24 
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110     33   0.41 
03_01_0249 - 1935355-1935827,1936129-1936330                           30   2.2  
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932     30   2.2  
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931     29   3.8  
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899...    29   5.1  
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576...    29   6.7  
06_01_0786 - 5881178-5881303,5881523-5881627,5882078-5882169,588...    29   6.7  
02_05_1323 + 35700147-35701649                                         29   6.7  
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188     29   6.7  

>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
          Length = 221

 Score = 37.5 bits (83), Expect = 0.015
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
 Frame = +1

Query: 178 GQDFE----DHRVLSADWPDFKPKTPFGQMPVLXIXGKQYAQSTAICRYLGRKYGLXGAN 345
           G DF+    D R  +   P F    PFGQ+PVL    +   +S AI RY+  KY   GA+
Sbjct: 30  GLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGAD 89


>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
          Length = 221

 Score = 34.7 bits (76), Expect = 0.10
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 220 PDFKPKTPFGQMPVLXIXGKQYAQSTAICRYLGRKY 327
           PD   + PFGQ+P          +S AICRY+ RK+
Sbjct: 44  PDHLARNPFGQVPAFQDGDLMLFESRAICRYILRKH 79


>01_04_0021 -
           15151645-15151809,15152184-15152343,15152548-15153025,
           15153243-15153291,15153585-15153734
          Length = 333

 Score = 34.7 bits (76), Expect = 0.10
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 220 PDFKPKTPFGQMPVLXIXGKQYAQSTAICRYLGRKY 327
           P+   + PFG++PVL        QS AI RY+ RKY
Sbjct: 44  PEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKY 79


>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
          Length = 220

 Score = 33.5 bits (73), Expect = 0.24
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +1

Query: 193 DHRVLSADWPDFKPKTPFGQMPVLXIXGKQYAQSTAICRYLGRKYGLXGAN 345
           D + +    P+   + PFGQMP          +S A+ RY+ RKY    AN
Sbjct: 35  DFKAMEHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEAN 85


>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
          Length = 215

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 220 PDFKPKTPFGQMPVLXIXGKQYAQSTAICRYLGRK 324
           PD   + PFGQ+P L        +S AIC+Y+ RK
Sbjct: 44  PDHLARNPFGQVPALQDGDLFLWESRAICKYVCRK 78


>03_01_0249 - 1935355-1935827,1936129-1936330
          Length = 224

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 220 PDFKPKTPFGQMPVLXIXGKQYAQSTAICRYLGRKYGLXG 339
           P F    PFGQ+P          +S AICRY+  +Y   G
Sbjct: 45  PSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYADSG 84


>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
          Length = 219

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 193 DHRVLSADWPDFKPKTPFGQMPVLXIXGKQYAQSTAICRYLGRKY 327
           D  V+    P+   + PFGQ+P          +S AI +Y+ RKY
Sbjct: 35  DFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKY 79


>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
          Length = 218

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 220 PDFKPKTPFGQMPVLXIXGKQYAQSTAICRYLGRKY 327
           P+   + PFG++P L        +S AI +Y+ RKY
Sbjct: 44  PEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKY 79


>06_03_0529 -
           21788132-21788395,21788414-21788511,21789458-21789953,
           21790033-21790134,21790218-21790270,21790354-21790414,
           21790491-21790640,21791298-21791350,21794125-21794152
          Length = 434

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 220 PDFKPKTPFGQMPVLXIXGKQYAQSTAICRYLGR 321
           P+F    P G++PVL        +S AI RY+ R
Sbjct: 67  PEFLKMNPLGKIPVLETPEGAVFESNAIARYVAR 100


>12_01_0675 +
           5759641-5759722,5760247-5760291,5760690-5760775,
           5760888-5760959,5761210-5761263,5761385-5761460,
           5761778-5761839,5762174-5762233,5762331-5762432
          Length = 212

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +1

Query: 157 RMLLXYGGQDFEDHRVLSADWPDFKPKTPFGQMPVLXIXGKQYAQSTAICRYLGRKY 327
           R++L   G D+E   V     PD++   P   +P L       + S AI  YL  KY
Sbjct: 21  RIVLNLKGVDYEYKSVNPRTDPDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKY 77


>06_01_0786 -
           5881178-5881303,5881523-5881627,5882078-5882169,
           5882267-5882336,5882639-5882724,5882916-5883017,
           5883375-5883597,5883693-5883758,5883896-5883986,
           5884019-5884057,5885401-5885548,5885623-5885715,
           5885782-5885886,5886645-5886826,5886912-5887084
          Length = 566

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 243 RSLWLEVRPVSGEHAVVFEVLASVGEQHTAALPESLA 133
           R LW+E RP  G  AV+ +  A  G       PE  A
Sbjct: 46  RLLWVETRPEEGGRAVLVKEAAEPGGDAVDVTPEGFA 82


>02_05_1323 + 35700147-35701649
          Length = 500

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 23  IGNSLRFEFSLXPIXPSAXRLTTIN*KCLRLCTITSLARLSGRAA 157
           + N L   ++   +  SA R+  +N  C  +C+ TSL    GRAA
Sbjct: 124 VSNGLIHAYASCALLCSARRVFDVNVSCRDVCSWTSLLTAYGRAA 168


>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
          Length = 216

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +1

Query: 220 PDFKPKTPFGQMPVLXIXGKQYAQSTAICRYLGRKYG---LXGANDEEAFEIDXNVE 381
           P    + PFGQ+P          +S AI +Y+ RK+G   L  +N  E+  +D  +E
Sbjct: 44  PPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLE 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,710,329
Number of Sequences: 37544
Number of extensions: 223166
Number of successful extensions: 488
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)