Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_E13
(935 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor ... 37 0.092
BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, be... 37 0.092
BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, be... 37 0.092
AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, be... 37 0.092
AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, be... 37 0.092
AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, b... 37 0.092
AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, b... 37 0.092
AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, be... 37 0.092
AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, be... 37 0.092
AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, b... 37 0.092
AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, b... 37 0.092
AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor bet... 37 0.092
AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B p... 37 0.092
AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, be... 37 0.092
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 37 0.12
M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta ... 36 0.21
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 36 0.28
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain... 33 1.1
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 32 2.6
D87459-1|BAA13399.2| 567|Homo sapiens KIAA0269 protein. 32 3.4
BC044591-1|AAH44591.1| 559|Homo sapiens WAS protein family, mem... 32 3.4
AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr... 32 3.4
AL590009-1|CAI12485.1| 559|Homo sapiens WAS protein family, mem... 32 3.4
AF134303-1|AAD33052.1| 559|Homo sapiens Scar1 protein. 32 3.4
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein. 32 3.4
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 31 4.6
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 31 4.6
BC049204-1|AAH49204.1| 251|Homo sapiens homeobox B4 protein. 31 4.6
BC017651-1|AAH17651.1| 248|Homo sapiens ZNF584 protein protein. 31 4.6
AL137449-1|CAB70742.1| 246|Homo sapiens hypothetical protein pr... 31 4.6
AF307160-1|AAG45052.1| 251|Homo sapiens HOXB4 protein. 31 4.6
AF287967-4|AAG31554.1| 251|Homo sapiens homeobox B4 protein. 31 4.6
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 31 4.6
AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein. 31 4.6
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 31 6.0
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 31 6.0
>X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor b
protein.
Length = 533
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 137
>BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 137
>BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 137
>AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 137
>AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 137
>AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 137
>AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 137
>AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 137
>AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 137
>AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, beta
protein.
Length = 482
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 32 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 86
>AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 137
>AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor beta
protein.
Length = 533
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 137
>AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B
protein.
Length = 533
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 137
>AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, beta
variant protein.
Length = 577
Score = 37.1 bits (82), Expect = 0.092
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + SL + + P PP PP P P ++
Sbjct: 123 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVIS 177
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 36.7 bits (81), Expect = 0.12
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP P PL P P PS G N T S P PP PP P P
Sbjct: 1958 PPPPPPPPPLPPAPPQPSSMGPVKIPN-TVSTPLQAPPPTPPPPPPPPPPPP 2008
>M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta
protein.
Length = 533
Score = 35.9 bits (79), Expect = 0.21
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPT-XPXPXLA 773
P P PL PPPS G P + +L + + P PP PP P P ++
Sbjct: 83 PDSSSPNPLPQGVPPPSPPGPPLPPSTAPTLGGSGAPPPPPMPPPPLGSPFPVIS 137
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 35.5 bits (78), Expect = 0.28
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +2
Query: 593 LPXPXTPXKTTAGXPXPXXPPPLXHRXXSPQKXXXFVXVRSIXSXPPPXXP-PHXPXPRT 769
LP P P + P PPP H P + PPP P PH P P
Sbjct: 940 LPPPRAPALPSEARAPPPPPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPP 999
Query: 770 CPXL 781
P L
Sbjct: 1000 LPPL 1003
>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
protein 4 protein.
Length = 3599
Score = 33.5 bits (73), Expect = 1.1
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP P PL P P PS G N T S P PP PP P
Sbjct: 2003 PPPPPPPPPLPPAPPQPSSMGPVKIPN-TVSTPLQAPPPTPPPSAPPQVQLP 2053
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 32.3 bits (70), Expect = 2.6
Identities = 21/62 (33%), Positives = 23/62 (37%)
Frame = +3
Query: 612 PXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXPXLALXSPXT 791
P P P P PPPS G P L + + P P PP P P LA P
Sbjct: 326 PPLPPPPPPPPPLPPPSSAGPPPPP-PPPPLPNSPAPPN-PGGPPPAPPPPGLAPPPPPG 383
Query: 792 XF 797
F
Sbjct: 384 LF 385
Score = 32.3 bits (70), Expect = 2.6
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = +2
Query: 596 PXPXTPXKTTAGXPXPXXPPPLXHRXXSPQKXXXFVXVRSIXSXPPPXXPPHXPXPRTCP 775
P P P ++AG P P PPPL + P PPP PP P P
Sbjct: 334 PPPPLPPPSSAGPPPPPPPPPLPNSPAPPN-----------PGGPPPAPPPPGLAPPPPP 382
Query: 776 XL 781
L
Sbjct: 383 GL 384
>D87459-1|BAA13399.2| 567|Homo sapiens KIAA0269 protein.
Length = 567
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXPXLALXSP 785
P R P + P PPP P + S A PP PP P P AL +P
Sbjct: 319 PATGRTPVFVSPTPPPPPPP---LPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAP 374
>BC044591-1|AAH44591.1| 559|Homo sapiens WAS protein family, member
1 protein.
Length = 559
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXPXLALXSP 785
P R P + P PPP P + S A PP PP P P AL +P
Sbjct: 311 PATGRTPVFVSPTPPPPPPP---LPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAP 366
>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
protein.
Length = 1009
Score = 31.9 bits (69), Expect = 3.4
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 635 PXPXXPPPLXHRXXSPQKXXXFVXVRSIXSXPPPXXPPHXPXPRTCP 775
P P PPPL +P+ + PPP PP P P P
Sbjct: 441 PLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPP 487
>AL590009-1|CAI12485.1| 559|Homo sapiens WAS protein family, member
1 protein.
Length = 559
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXPXLALXSP 785
P R P + P PPP P + S A PP PP P P AL +P
Sbjct: 311 PATGRTPVFVSPTPPPPPPP---LPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAP 366
>AF134303-1|AAD33052.1| 559|Homo sapiens Scar1 protein.
Length = 559
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXPXLALXSP 785
P R P + P PPP P + S A PP PP P P AL +P
Sbjct: 311 PATGRTPVFVSPTPPPPPPP---LPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAP 366
>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
Length = 1112
Score = 31.9 bits (69), Expect = 3.4
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 635 PXPXXPPPLXHRXXSPQKXXXFVXVRSIXSXPPPXXPPHXPXPRTCP 775
P P PPPL +P+ + PPP PP P P P
Sbjct: 544 PLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPP 590
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP R P P P P + +G P + P PP PP P P
Sbjct: 338 PPNRMYPPP-PPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPP 388
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP R P P P P + +G P + P PP PP P P
Sbjct: 338 PPNRMYPPP-PPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPP 388
>BC049204-1|AAH49204.1| 251|Homo sapiens homeobox B4 protein.
Length = 251
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP P L P P P G P+ + S P PP P P P
Sbjct: 80 PPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQNPLHPSP 131
>BC017651-1|AAH17651.1| 248|Homo sapiens ZNF584 protein protein.
Length = 248
Score = 31.5 bits (68), Expect = 4.6
Identities = 17/64 (26%), Positives = 22/64 (34%)
Frame = +2
Query: 608 TPXKTTAGXPXPXXPPPLXHRXXSPQKXXXFVXVRSIXSXPPPXXPPHXPXPRTCPXLTX 787
+P + P P P + HR +P + R S PP PP P L
Sbjct: 32 SPARGEGQGPLPRLPRAVPHRRVAPSSSDLSLADRRRGSPGPPYRPPSQRLREAVPCLRT 91
Query: 788 HXVR 799
H R
Sbjct: 92 HFTR 95
>AL137449-1|CAB70742.1| 246|Homo sapiens hypothetical protein
protein.
Length = 246
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP P L P P P G P+ + S P PP P P P
Sbjct: 75 PPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQNPLHPSP 126
>AF307160-1|AAG45052.1| 251|Homo sapiens HOXB4 protein.
Length = 251
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP P L P P P G P+ + S P PP P P P
Sbjct: 80 PPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQNPLHPSP 131
>AF287967-4|AAG31554.1| 251|Homo sapiens homeobox B4 protein.
Length = 251
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP P L P P P G P+ + S P PP P P P
Sbjct: 80 PPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQNPLHPSP 131
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP R P P P P + +G P + P PP PP P P
Sbjct: 338 PPNRMYPPP-PPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPP 388
>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
Length = 1709
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPP---SXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXPXL 770
PP + P P P PPP S P L P PP PP P P +
Sbjct: 602 PPQQPPPPPPPPPPPPPYLASLPLGYPPHQPAYLLPPRPDGPPPPEYPPPPPPPPHI 658
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 31.1 bits (67), Expect = 6.0
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP P P P PPP P + P P PP P P
Sbjct: 97 PPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSP 148
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 31.1 bits (67), Expect = 6.0
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP P P P PPP P + P P PP P P
Sbjct: 642 PPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSP 693
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,379,317
Number of Sequences: 237096
Number of extensions: 1354332
Number of successful extensions: 8176
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 4406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6968
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12270013262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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