Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_E13
(935 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 0.90
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.2
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 27 1.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.7
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 3.6
U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical pr... 29 4.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.8
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 8.3
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 8.3
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 8.3
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 28 8.3
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/73 (30%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Frame = +2
Query: 596 PXPXTPXKTTAGXPXPXXPPPLXHRXXSPQKXXXFVXVRSIXSXP---PPXXPPHXPXPR 766
P P P K+ AG P PPP P + P PP PP P PR
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP-SPEPR 181
Query: 767 TCPXLTXHXVRPP 805
P + PP
Sbjct: 182 NPPRTPPSPIPPP 194
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXP--XPPXXXPPTXPXP 764
PP P P PPP+ TG P +S P PP PPT P
Sbjct: 307 PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 360
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 4/56 (7%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQS----XPXPPXXXPPTXPXP 764
PP P P PPP TG P S ++ P PP PPT P
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXP--XPPXXXPPTXPXP 764
PP P P PPP+ TG P +S P PP PPT P
Sbjct: 328 PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 381
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 4/56 (7%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQS----XPXPPXXXPPTXPXP 764
PP P P PPP TG P S ++ P PP PPT P
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXP--XPPXXXPPTXPXP 764
PP P P PPP+ TG P +S P PP PPT P
Sbjct: 313 PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 366
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 4/56 (7%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQS----XPXPPXXXPPTXPXP 764
PP P P PPP TG P S ++ P PP PPT P
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.5 bits (58), Expect(2) = 1.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 587 GTLPXPXTPXKTTAGXPXPXXPPP 658
G +P P P +T P P PPP
Sbjct: 120 GGVPAPPNPPRTCCPPPTPAAPPP 143
Score = 21.4 bits (43), Expect(2) = 1.9
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 728 PPPXXPPHXPXP 763
PPP PP P P
Sbjct: 141 PPPPPPPPPPAP 152
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +2
Query: 590 TLPXPXTPXKTTAGXPXPXXPPPLXHRXXSPQKXXXFVXVRSIXSXPPPXXPPHXPXP 763
T P P P + P P P + SP + + S PPP PP P P
Sbjct: 468 TTPKPAPPPPSRIPNPSPSPQPAEVSK--SPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXPXLALXSPX 788
PP R P P P P + P + S P PP PP P + P
Sbjct: 475 PPPSRIPNP-SPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPALEQEISGPP 533
Query: 789 T 791
T
Sbjct: 534 T 534
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +3
Query: 594 YQXXXPPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXPXLA 773
++ PP P PL P PPP P + P PP PP P
Sbjct: 21 FERPPPPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPPPW--DRPPPPWRRPPWHRRPPWG 78
Query: 774 LXSP 785
L P
Sbjct: 79 LPPP 82
>U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical
protein T07H6.4 protein.
Length = 702
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 147 GVVLNSGSGATERRGQ*APLKSRQSSWSXP*KRNC 43
G +LN G T + P+K R+ W K NC
Sbjct: 269 GTILNVGCLTTSNSAETVPIKCRRGKWGYKKKLNC 303
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +2
Query: 587 GTLPXPXTPXKTTAGXPXPXXPPPLXHRXXSPQKXXXFVXVRSIXSXPPPXXPPHXPXP 763
G P P P A P P PPP+ P PPP PP P P
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPP-------MCPPPPPPPPPPMCPPP 77
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP P P P P TG P L P PP P P P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP P P P P TG P L P PP P P P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 609 PPXRRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
PP P P P P TG P L P PP P P P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 7/66 (10%)
Frame = +3
Query: 609 PPXRRXPAPLXPXX--PPPSXTGXXXPKNXTXSLXYAQSXPX-----PPXXXPPTXPXPX 767
PP P P P PP G P + YA P PP PP+ P P
Sbjct: 83 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPT 142
Query: 768 LALXSP 785
+ +P
Sbjct: 143 SSAAAP 148
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 7/66 (10%)
Frame = +3
Query: 609 PPXRRXPAPLXPXX--PPPSXTGXXXPKNXTXSLXYAQSXPX-----PPXXXPPTXPXPX 767
PP P P P PP G P + YA P PP PP+ P P
Sbjct: 106 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPT 165
Query: 768 LALXSP 785
+ +P
Sbjct: 166 SSAAAP 171
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 7/66 (10%)
Frame = +3
Query: 609 PPXRRXPAPLXPXX--PPPSXTGXXXPKNXTXSLXYAQSXPX-----PPXXXPPTXPXPX 767
PP P P P PP G P + YA P PP PP+ P P
Sbjct: 356 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPT 415
Query: 768 LALXSP 785
+ +P
Sbjct: 416 SSAAAP 421
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +3
Query: 618 RRXPAPLXPXXPPPSXTGXXXPKNXTXSLXYAQSXPXPPXXXPPTXPXP 764
R P P PPP TG P++ + A P PP T P P
Sbjct: 63 RPPPPPKGTGTPPPPPTGE--PQDLSAEEGNASRRPPPPPKGTGTPPPP 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,148,434
Number of Sequences: 27780
Number of extensions: 190264
Number of successful extensions: 918
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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