Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_E11
         (931 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060765-1|AAL28313.1|  108|Drosophila melanogaster GH22881p pro...    50   6e-06
AE014134-1175|AAN10602.2|  108|Drosophila melanogaster CG17377-P...    50   6e-06
AE014134-1174|AAN10601.1|  287|Drosophila melanogaster CG17377-P...    50   6e-06
AE014134-1173|AAF52442.3|  173|Drosophila melanogaster CG17377-P...    50   6e-06

>AY060765-1|AAL28313.1|  108|Drosophila melanogaster GH22881p
           protein.
          Length = 108

 Score = 49.6 bits (113), Expect = 6e-06
 Identities = 19/41 (46%), Positives = 23/41 (56%)
 Frame = +3

Query: 603 GLCITAATGIKRNGLQHDCRRTGCXGEPTCLALPDPLCAPS 725
           G+  T    +KRNGLQ  C R+ C G P CL  P P C P+
Sbjct: 21  GIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61


>AE014134-1175|AAN10602.2|  108|Drosophila melanogaster CG17377-PB,
           isoform B protein.
          Length = 108

 Score = 49.6 bits (113), Expect = 6e-06
 Identities = 19/41 (46%), Positives = 23/41 (56%)
 Frame = +3

Query: 603 GLCITAATGIKRNGLQHDCRRTGCXGEPTCLALPDPLCAPS 725
           G+  T    +KRNGLQ  C R+ C G P CL  P P C P+
Sbjct: 21  GIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61


>AE014134-1174|AAN10601.1|  287|Drosophila melanogaster CG17377-PC,
           isoform C protein.
          Length = 287

 Score = 49.6 bits (113), Expect = 6e-06
 Identities = 19/41 (46%), Positives = 23/41 (56%)
 Frame = +3

Query: 603 GLCITAATGIKRNGLQHDCRRTGCXGEPTCLALPDPLCAPS 725
           G+  T    +KRNGLQ  C R+ C G P CL  P P C P+
Sbjct: 21  GIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61


>AE014134-1173|AAF52442.3|  173|Drosophila melanogaster CG17377-PA,
           isoform A protein.
          Length = 173

 Score = 49.6 bits (113), Expect = 6e-06
 Identities = 19/41 (46%), Positives = 23/41 (56%)
 Frame = +3

Query: 603 GLCITAATGIKRNGLQHDCRRTGCXGEPTCLALPDPLCAPS 725
           G+  T    +KRNGLQ  C R+ C G P CL  P P C P+
Sbjct: 21  GIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,833,160
Number of Sequences: 53049
Number of extensions: 706970
Number of successful extensions: 1502
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4587341472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)