Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_E07
(945 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein L19B|Schizosa... 80 4e-16
SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein L19|Schizosac... 80 4e-16
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 9e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.044
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 33 0.077
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.10
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.14
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.41
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.72
SPBC28E12.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 2.9
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 27 3.8
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 26 6.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 8.9
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 26 8.9
>SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein
L19B|Schizosaccharomyces pombe|chr 3|||Manual
Length = 193
Score = 80.2 bits (189), Expect = 4e-16
Identities = 33/49 (67%), Positives = 44/49 (89%)
Frame = +2
Query: 92 MSSLKLQKRLAXSVMRCGKKKVWLDPNEINXIANTNSRQNIXKMIKDGL 238
M++L+ QKRLA SV++CGK+KVW+DPNEI+ I+N NSRQNI K++KDGL
Sbjct: 1 MANLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNIRKLVKDGL 49
Score = 74.1 bits (174), Expect = 3e-14
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +3
Query: 240 LIKKPVXVHSRARVRXNTXPRTKGRHCGFGXXXGTXNAXMPQNELWVQRQRVXRKLLLNY 419
+I+KP +HSR R+R + GRH G+G GT A MP +W++RQRV R+LL Y
Sbjct: 50 VIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSTVVWMRRQRVLRRLLRKY 109
Query: 420 XTAXXXDXHLYHSXLXE 470
+ D HLYH+ E
Sbjct: 110 RESGKIDKHLYHTLYLE 126
>SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein
L19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 193
Score = 80.2 bits (189), Expect = 4e-16
Identities = 33/49 (67%), Positives = 44/49 (89%)
Frame = +2
Query: 92 MSSLKLQKRLAXSVMRCGKKKVWLDPNEINXIANTNSRQNIXKMIKDGL 238
M++L+ QKRLA SV++CGK+KVW+DPNEI+ I+N NSRQN+ K+IKDGL
Sbjct: 1 MANLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNVRKLIKDGL 49
Score = 73.3 bits (172), Expect = 4e-14
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +3
Query: 240 LIKKPVXVHSRARVRXNTXPRTKGRHCGFGXXXGTXNAXMPQNELWVQRQRVXRKLLLNY 419
+I+KP +HSR R+R + GRH G+G GT A MP +W++RQRV R+LL Y
Sbjct: 50 VIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVLRRLLRKY 109
Query: 420 XTAXXXDXHLYHSXLXE 470
+ D HLYH+ E
Sbjct: 110 RESGKIDKHLYHTLYLE 126
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.1 bits (87), Expect = 9e-04
Identities = 18/62 (29%), Positives = 22/62 (35%)
Frame = +2
Query: 518 IPXAPXXXKAHPPTXPTXXPXAXPPSPXPTPXXPPPXXAXXXXXPXQPAAXPXXXXXPXP 697
+P P + PP+ P P + P P PP PAA P P P
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Query: 698 PP 703
PP
Sbjct: 477 PP 478
Score = 35.1 bits (77), Expect = 0.015
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = +2
Query: 530 PXXXKAHPPTXPTXXPXAXPPSPXPTPXXP--PPXXAXXXXXPXQPAAXPXXXXXPXPPP 703
P + PP+ P P P +P P P PP A P P A P P P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/64 (29%), Positives = 22/64 (34%), Gaps = 6/64 (9%)
Frame = +2
Query: 530 PXXXKAHPPTXPTXXPXAXPPSPXPT-PXXPPP-----XXAXXXXXPXQPAAXPXXXXXP 691
P + T P P + PPS P+ P PP A P P A P P
Sbjct: 405 PLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
Query: 692 XPPP 703
PP
Sbjct: 465 AAPP 468
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +2
Query: 521 PXAPXXXKAHPPTXPTXXPXAXPPSPXPTPXXPPPXXAXXXXXPXQPAAXP 673
P P A PP P+ P A PP P P PP A P PA P
Sbjct: 437 PSLPMGAPAAPPLPPS-APIA-PPLPAGMPAAPPLPPA-APAPPPAPAPAP 484
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 521 PXAPXXXKAHPPTXPTXXPXAXPPSPXPTPXXPPPXXAXXXXXPXQPAAXPXXXXXPXPP 700
P P A + P P PPS P+ P A PAA P P P
Sbjct: 401 PALPPLGNASRTSTP---PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Query: 701 P 703
P
Sbjct: 458 P 458
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.044
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +2
Query: 545 AHPPTXPTXXPXAXPPSPXPTPXXPPPXXAXXXXXPXQPAAXPXXXXXPXPPP 703
AHP + P P + P P PPP + P P+A P P PP
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPPPMS----VPPPPSAPPMPAGPPSAPP 1732
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 32.7 bits (71), Expect = 0.077
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = +2
Query: 545 AHPPTXPTXXPXAXPPSPXPT----PXXPPPXXAXXXXXPXQPAAXP 673
A PP P P A PPS PT P PP P PA P
Sbjct: 1881 APPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.10
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +2
Query: 542 KAHPPTXPTXXPXAXPPSPXPTPXXPPPXXAXXXXXPXQPAAXPXXXXXPXPPPXXXS 715
K+ PP P P+P P P P P P P P PPP S
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVP-PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 521 PXAPXXXKAHPPTXPTXXPXAXPPSPXPTP 610
P AP PP P A PP P P P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 521 PXAPXXXKAHPPTXPTXXPXAXPPSPXPTPXXPPPXXAXXXXXPXQP 661
P P P P P P P P PPP A P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.14
Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 6/68 (8%)
Frame = +2
Query: 518 IPXAPXXXKAHPPTXPTXXPXAXPPSPXPT---PXXPPPXXAXXXXXP---XQPAAXPXX 679
IP P PP P P PP P P+ P PPP A P P P
Sbjct: 1178 IPPVPKPAAGVPPVPP---PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTA 1234
Query: 680 XXXPXPPP 703
P P P
Sbjct: 1235 KAPPVPAP 1242
Score = 31.5 bits (68), Expect = 0.18
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +2
Query: 527 APXXXKAHPPTXPTXXPXAXPPSPXPTPXXPPPXXAXXXXXPXQPAAXPXXXXXPXPPP 703
AP K P P PP P P+ PP A P P P P PPP
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPS-VAAPPVPAPSSGIP--PVPKPAAGVPPVPPP 1194
Score = 29.5 bits (63), Expect = 0.72
Identities = 17/60 (28%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +2
Query: 527 APXXXKAHPPTXPTXXPXAXPPSPXPTPXXPP-PXXAXXXXXPXQPAAXPXXXXXPXPPP 703
AP K P P PP P P+ PP P + P A P PP
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 29.1 bits (62), Expect = 0.95
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 5/66 (7%)
Frame = +2
Query: 521 PXAPXXXKAHPPTX-PTXXPXAXPPS----PXPTPXXPPPXXAXXXXXPXQPAAXPXXXX 685
P P A PP P+ P PS P P P PP P PA P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPA--PSSGI 1178
Query: 686 XPXPPP 703
P P P
Sbjct: 1179 PPVPKP 1184
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/59 (25%), Positives = 16/59 (27%)
Frame = +2
Query: 527 APXXXKAHPPTXPTXXPXAXPPSPXPTPXXPPPXXAXXXXXPXQPAAXPXXXXXPXPPP 703
AP P P PP P PT P P + P P P P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.41
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 521 PXAPXXXKAHPPTXPTXXPXAXPPSPXPTPXXPPPXXAXXXXXPXQPAAXPXXXXXPXPP 700
P P A P P+ P PS P P P P P+A P PP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPI--PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Query: 701 P 703
P
Sbjct: 205 P 205
Score = 29.9 bits (64), Expect = 0.55
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +2
Query: 551 PPTXPTXXPXAXPPSPXPTPXXP--PPXXAXXXXXPXQPAA 667
PPT P PPSP P P P P QPAA
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAA 179
Score = 29.5 bits (63), Expect = 0.72
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +2
Query: 554 PTXPTXXPXAXPP-SPXPTPXXPPPXXAXXXXXPXQPAAXPXXXXXPXPP 700
P PT PP S P P PPP A P + P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.72
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 591 PPRXPXPPPPXHXXLXPXQXPXNPXP 668
PP P PPPP P Q P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 546 PTHQPXXPTXLXPXPPPRXPXPPPPXH 626
P + P P PP + P PPPP +
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPGY 32
>SPBC28E12.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 214 DVLSGVGVCDXIDFIWIQPHLLFTTSHNRGCK 119
+VLS + +D + PHLL +S N+ CK
Sbjct: 237 EVLSKLPYFHILDKSFFSPHLLLQSSENQACK 268
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/49 (26%), Positives = 15/49 (30%)
Frame = +2
Query: 515 YIPXAPXXXKAHPPTXPTXXPXAXPPSPXPTPXXPPPXXAXXXXXPXQP 661
+ P P + P P P PP P P P A P P
Sbjct: 267 HFPGMPAMPMMNVPMGPGGAPLVPPPPPGMVMASPSPAAATIPGAPVMP 315
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 235 TILDHLXDVLSGVGVCDXIDFIWIQPHLLF 146
+I +H+ DV G+ V I+ + I+P +LF
Sbjct: 351 SICEHVSDVSRGIAVETLIELMIIRPKILF 380
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +3
Query: 558 PXXPTXLXPXPPPRXPXPPPPXHXXLXPXQXPXNPXPXP 674
P P P P PPPP L P + P P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +3
Query: 543 RPTHQPXXPTXLXPXPPPRXPXPPPPXHXXLXPXQXP 653
+P P PT P P + PPPP + P P
Sbjct: 724 KPQVTPAPPTPA-PTPAVKHHPPPPPVRSSISPSMPP 759
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 140 CGKKKVWLD-PNEINXIANTNSRQNIXKMIKDGLXHQETCXSTLPRSCPQXH 292
C K K+W D PN+ + + I + + D H +TC LP S H
Sbjct: 209 CNKCKLWDDDPNKSSYHCDDCGICRIGRGLGDDYFHCKTCGLCLPISVFNTH 260
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,129,786
Number of Sequences: 5004
Number of extensions: 32014
Number of successful extensions: 227
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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