Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_D17
(968 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 29 0.27
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 33 0.31
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.71
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.71
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.71
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.93
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.93
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 1.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.6
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 31 1.6
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.6
AL132860-6|CAB60526.1| 373|Caenorhabditis elegans Hypothetical ... 30 2.8
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 29 3.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.8
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 3.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 3.8
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 3.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.0
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 6.6
U55364-13|AAM29677.1| 250|Caenorhabditis elegans Hypothetical p... 29 6.6
U55364-12|AAA97977.2| 260|Caenorhabditis elegans Hypothetical p... 29 6.6
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 6.6
AF022983-5|AAK82915.1| 79|Caenorhabditis elegans Hypothetical ... 29 6.6
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -1
Query: 929 GGXXPXGGXXGCXXXGXEXGXGXXIXGQGXGXXGGXXEXGXRXGGG 792
GG GG GC G G G G G G GG G GGG
Sbjct: 138 GGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGG 183
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = -1
Query: 929 GGXXPXGGXXGCXXXGXE--XGXGXXIXGQGXGXXGGXXEXGXRXGGG 792
GG GG GC G G G G G G GG G GGG
Sbjct: 130 GGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 177
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 29.1 bits (62), Expect(2) = 0.27
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 853 GGRGGGXXGGXXKXGRGWXXEG 788
GGRGGG GG + GRG G
Sbjct: 179 GGRGGGRRGGRGRGGRGRGGRG 200
Score = 23.0 bits (47), Expect(2) = 0.27
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 907 EXXGVXGXGVXXGXVXGXGGRGGG 836
E G G G G GGRGGG
Sbjct: 137 EEGGAPRGGGRGGSRRGGGGRGGG 160
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical protein
T07D4.3 protein.
Length = 1301
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -2
Query: 898 GVXGXGVXXGXVXGXGGRGGGXXGGXXKXGRGW 800
G G G G G GGRGGG GG GRGW
Sbjct: 1268 GYRGAGGGGGYRGGRGGRGGGRGGG----GRGW 1296
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +1
Query: 793 PPPXLXPSSXXPPXXPXP---CPXIXXPXPXSXPXXXHPXLPPXGXXPP 930
PP L P S PP P P CP P P P PP G P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 793 PPPXLXPSSXXPPXXPXPCPXIXXPXPXSXPXXXHP-XLPPXGXXPP 930
PPP L P + PP P P P P P P LPP PP
Sbjct: 715 PPPGLPPITGGPP--PPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +1
Query: 793 PPPXLXPSSXXPPXXPXP---CPXIXXPXPXSXPXXXHPXLPPXGXXPP 930
PP L P S PP P P CP P P P PP G P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 793 PPPXLXPSSXXPPXXPXPCPXIXXPXPXSXPXXXHP-XLPPXGXXPP 930
PPP L P + PP P P P P P P LPP PP
Sbjct: 715 PPPGLPPITGGPP--PPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +1
Query: 793 PPPXLXPSSXXPPXXPXP---CPXIXXPXPXSXPXXXHPXLPPXGXXPP 930
PP L P S PP P P CP P P P PP G P
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 793 PPPXLXPSSXXPPXXPXPCPXIXXPXPXSXPXXXHP-XLPPXGXXPP 930
PPP L P + PP P P P P P P LPP PP
Sbjct: 298 PPPGLPPITGGPP--PPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.93
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 929 GGXXPXGGXXGCXXXGXEXGXGXXIXGQGXGXXGGXXEXGXRXGGG 792
GG GG GC G G G G G GG G GGG
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGG 106
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -1
Query: 929 GGXXPXGGXXGCXXXGXE-XGXGXXIXGQGXGXXGGXXEXGXRXGGG 792
GG GG GC G G G G G G GG G GGG
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 929 GGXXPXGGXXGCXXXGXEXGXGXXIXGQGXGXXGGXXEXGXRXGG 795
GG GG GC G G G G G G G G GG
Sbjct: 106 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGG 150
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = -1
Query: 929 GGXXPXGGXXGC--XXXGXEXGXGXXIXGQGXGXXGGXXEXGXRXGGG 792
GG GG GC G G G G G GG G GGG
Sbjct: 113 GGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGG 160
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.93
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 929 GGXXPXGGXXGCXXXGXEXGXGXXIXGQGXGXXGGXXEXGXRXGGG 792
GG GG GC G G G G G GG G GGG
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGG 106
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -1
Query: 929 GGXXPXGGXXGCXXXGXE-XGXGXXIXGQGXGXXGGXXEXGXRXGGG 792
GG GG GC G G G G G G GG G GGG
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 929 GGXXPXGGXXGCXXXGXEXGXGXXIXGQGXGXXGGXXEXGXRXGG 795
GG GG GC G G G G G G G G GG
Sbjct: 106 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGG 150
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = -1
Query: 929 GGXXPXGGXXGC--XXXGXEXGXGXXIXGQGXGXXGGXXEXGXRXGGG 792
GG GG GC G G G G G GG G GGG
Sbjct: 113 GGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGG 160
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 793 PPPXLXPSSXXPPXXPXPCPXIXXPXPXSXPXXXHPXLPPXGXXPP 930
PPP + P P CP P P P P PP PP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -1
Query: 929 GGXXPXGGXXGCXXXGXEXGXGXXIXGQGXGXXGGXXEXGXRXGGG 792
GG GG GC G G G G G G GG G GGG
Sbjct: 86 GGGGCGGG--GCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGG 129
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 889 GXGVXXGXVXGXGGRGGGXXGGXXKXGRG 803
G G G G GGRGGG GG + G G
Sbjct: 97 GGGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 898 GVXGXGVXXGXVXGXGGRGGGXXGGXXKXGRG 803
G G G G GGRGGG GG + G G
Sbjct: 77 GGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGG 108
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 928 GGXXXXXEXXGVXGXGVXXGXVXGXGGRGGGXXGGXXKXGRG 803
GG G G G G G GGRGGG G G G
Sbjct: 77 GGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGG 118
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +1
Query: 793 PPPXLXPSSXXPPXXPXPCPXIXXPXPXSXPXXXHPXLPPXGXXPP 930
P P P PP P PCP P P P P +P PP
Sbjct: 44 PMPMPMPMPVCPP--PPPCPAQFCPPPPICPPPPPPPMPCPPPPPP 87
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 767 PPXPXLXPFXXPXSXXLPXXPPSXPXPA 850
PP P L P P S P PP P PA
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPPPPPA 524
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 760 TVSSXSXXXXLPPPXLXPSSXXPPXXPXPCPXIXXPXPXSXPXXXHPXLPPXGXXPP 930
T ++ + PPP L PS+ P P P + P P +P PP G PP
Sbjct: 44 TAAAVAALVRKPPPSLPPSTM--PPGPHGMPFMGGPPPHHQYHLQYP--PPHGLGPP 96
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -2
Query: 898 GVXGXGVXXGXVXGXGG-RGGGXXGGXXKXGRGWXXEGX*XXXW 770
G G G G G GG RGGG GG G W G W
Sbjct: 45 GPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDW 88
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -1
Query: 929 GGXXPXGGXXGCXXXGXEXGXGXXIXGQGXGXXG-GXXEXGXRXGGGR 789
GG GG G G G G G G G G G R GGGR
Sbjct: 54 GGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGR 101
>AL132860-6|CAB60526.1| 373|Caenorhabditis elegans Hypothetical
protein Y56A3A.9 protein.
Length = 373
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 793 PPPXLXPSSXXPPXXPXPCPXIXXPXPXS 879
PPP P PP P P P + P P S
Sbjct: 28 PPPQDLPGLQDPPLTPLPLPPLLCPHPLS 56
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/57 (28%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = +1
Query: 748 PRLXTVSSXSXXXXLPPPXLXPSSXXPPXXPXPC--PXIXXPXPXSXPXXXHPXLPP 912
P T S + + PP P PP P P + P P HP PP
Sbjct: 459 PPSHTAKSHTVKSPMTPPVSQPPVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTPP 515
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/57 (28%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = +1
Query: 748 PRLXTVSSXSXXXXLPPPXLXPSSXXPPXXPXPC--PXIXXPXPXSXPXXXHPXLPP 912
P T S + + PP P PP P P + P P HP PP
Sbjct: 523 PPSHTAKSHTVKSPMTPPVSQPPVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTPP 579
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/55 (27%), Positives = 17/55 (30%)
Frame = +1
Query: 748 PRLXTVSSXSXXXXLPPPXLXPSSXXPPXXPXPCPXIXXPXPXSXPXXXHPXLPP 912
P L + + PPP P P P P P P P P PP
Sbjct: 82 PPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPP 136
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +1
Query: 760 TVSSXSXXXXLPPPXLXPSSXXPPXXPXPCPXIXXPXP-XSXPXXXHPXLPPXGXXPP 930
+ S+ S PPP + +S P P P P I P + P LPP G P
Sbjct: 190 STSAGSSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAP 247
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +1
Query: 760 TVSSXSXXXXLPPPXLXPSSXXPPXXPXPCPXIXXPXP-XSXPXXXHPXLPPXGXXPP 930
+ S+ S PPP + +S P P P P I P + P LPP G P
Sbjct: 176 STSAGSSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAP 233
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +1
Query: 760 TVSSXSXXXXLPPPXLXPSSXXPPXXPXPCPXIXXPXP-XSXPXXXHPXLPPXGXXPP 930
+ S+ S PPP + +S P P P P I P + P LPP G P
Sbjct: 176 STSAGSSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAP 233
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 790 LPPPXLXPSSXXPPXXPXPCPXIXXPXPXSXPXXXHPXLPPXGXXP 927
+PPP + PP P P P P S P PP G P
Sbjct: 263 VPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP 308
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 790 LPPPXLXPSSXXPPXXPXPCPXIXXPXPXSXPXXXHPXLPPXGXXP 927
+PPP + PP P P P P S P PP G P
Sbjct: 273 VPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP 318
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.6
Identities = 26/94 (27%), Positives = 30/94 (31%), Gaps = 2/94 (2%)
Frame = -2
Query: 898 GVXGXGVXXGXVXGXGGRGGGXXGGXXKXGRGWXXE--GX*XXXWRRPLXGVEXMRKGXX 725
G G G G G GG GG GG GW + G W G + G
Sbjct: 61 GGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGSQGGSQGGSSGGW 120
Query: 724 XFPEGGERXDRVSG*AXRVGNREGARGEXCQGGN 623
G R D SG G + G GG+
Sbjct: 121 G---GSSRSDSGSGQGGWGGQQGGNSNAGGWGGS 151
>U55364-13|AAM29677.1| 250|Caenorhabditis elegans Hypothetical
protein F21C10.3b protein.
Length = 250
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 853 GGRGGGXXGGXXKXGRG 803
GGRGGG GG + GRG
Sbjct: 25 GGRGGGGRGGGGRGGRG 41
>U55364-12|AAA97977.2| 260|Caenorhabditis elegans Hypothetical
protein F21C10.3a protein.
Length = 260
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 853 GGRGGGXXGGXXKXGRG 803
GGRGGG GG + GRG
Sbjct: 25 GGRGGGGRGGGGRGGRG 41
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 859 GXGGRGGGXXGGXXKXGRGWXXEG 788
G GG GGG GG G GW G
Sbjct: 214 GSGGGGGGGGGGGYGSGGGWGGGG 237
>AF022983-5|AAK82915.1| 79|Caenorhabditis elegans Hypothetical
protein R13D11.10 protein.
Length = 79
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -2
Query: 898 GVXGXGVXX-GXVXGXGGRGGGXXGGXXKXGRGW 800
G G G G G GGRG G GG G GW
Sbjct: 44 GYGGYGYRPYGGYGGWGGRGMGGWGGRGMGGWGW 77
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 926 GXXPXGGXXGCXXXGXEXGXGXXIXGQGXGXXGGXXEXGXRXGGG 792
G GG G G G G G G G GG G GGG
Sbjct: 83 GGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGG 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,466,011
Number of Sequences: 27780
Number of extensions: 296075
Number of successful extensions: 1259
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2510937120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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