Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_D09
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0771 + 6453130-6454488                                           36   0.057
09_04_0426 - 17451731-17451886,17451974-17452079,17452289-174523...    30   2.1  
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686...    30   2.8  
01_01_1013 - 8015552-8015613,8016898-8018035                           30   2.8  
11_01_0750 - 6315126-6315896,6316371-6316784                           29   4.9  
10_08_0762 - 20410681-20411834,20411999-20412098,20412200-204122...    29   6.5  
01_01_1152 + 9170628-9171899                                           29   6.5  
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423...    28   8.6  

>11_01_0771 + 6453130-6454488
          Length = 452

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +2

Query: 617 IDPATAVAMFNVIFFQGHXHVPFNASETEXK 709
           + P TAV + N I+F+G    PFN S+TE K
Sbjct: 198 VGPETAVVLGNAIYFKGKWDRPFNESDTERK 228


>09_04_0426 -
           17451731-17451886,17451974-17452079,17452289-17452387,
           17452782-17452888,17452985-17453230,17454187-17454461,
           17454834-17454886,17455163-17455455
          Length = 444

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 132 RRRSTCSVMNSQGQDSAMPSTRPPCKILKESYNLADDKNVIAS 260
           RR ST +V  S G  +  P  R   + LKE Y+++D  N+ A+
Sbjct: 37  RRSSTVTVSGSNGYSAHEPGARVSSR-LKEEYSVSDQSNLKAA 78


>09_06_0317 -
           22265786-22267618,22267874-22268446,22268546-22268677,
           22268931-22269137,22269287-22269388,22270742-22271032
          Length = 1045

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 364 TLEPPLPQGFPLSLPWTVHRLQTRXK 287
           +L PPLP G PLS P+     QT  K
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEK 776


>01_01_1013 - 8015552-8015613,8016898-8018035
          Length = 399

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +3

Query: 210 ILKESYNLADDKNVIASPLGVMLL-LSLXRVWSRCTVQGRDKGNPWGRGGSRVN-THIRI 383
           I K  +++AD   ++ S    +L+  S+  +W+   V    +  PWG  G  V+ T +  
Sbjct: 153 ITKTIFHVADLHPIVGSDKAALLIYFSVPEIWATHVVDYPPRDRPWGGNGVVVHKTIVWW 212

Query: 384 IKSALRXIRPEILDCRQ*NIRFRPV 458
           +  +   +  +I   RQ N+RF P+
Sbjct: 213 VDLSYGLLSCDISARRQ-NLRFVPL 236


>11_01_0750 - 6315126-6315896,6316371-6316784
          Length = 394

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = +1

Query: 382 LLNQRYAXFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVXNINF-SAPKNAADII 555
           +L  R     P+ L  A  ++      L+  F   A N++ S     +F + P++A D I
Sbjct: 88  VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146

Query: 556 NRWADEQTQGHIKT 597
           N W  + T+G + T
Sbjct: 147 NSWVKDSTKGTVTT 160


>10_08_0762 - 20410681-20411834,20411999-20412098,20412200-20412298,
            20412563-20414133,20415080-20415128
          Length = 990

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +2

Query: 443  TFPTSISWPTRSPEQRICSEAKXTTLTSALRRMPLISSTVGRTNRLKDT*RLLLSEDXID 622
            +FP +I WP  + +  IC        T+  +  PLISS+V R +        +L E+   
Sbjct: 936  SFPMNIGWPLSTMDSHIC--------TAGSQETPLISSSVHRYDIFPPKWEHMLKENFFH 987

Query: 623  P 625
            P
Sbjct: 988  P 988


>01_01_1152 + 9170628-9171899
          Length = 423

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 593 RLLLSEDXIDPATAVAMFNVIFFQGHXHVPFNASET 700
           R +L  + +D +T V + N + F+G   +PF+ S T
Sbjct: 176 RDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSAT 211


>01_06_1263 +
           35840502-35841308,35841763-35841969,35842272-35842370,
           35843361-35843464,35844521-35844698,35844774-35845244,
           35845383-35845523,35846290-35846349,35846427-35846490,
           35847295-35847524,35847606-35847704
          Length = 819

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/80 (25%), Positives = 34/80 (42%)
 Frame = +2

Query: 335 KSLGEGRLKSQHTHTDY*ISVTXNSTRNS*LSPIKYTFPTSISWPTRSPEQRICSEAKXT 514
           K+  +G L +++   +  + +  N T  +  S  K   P S S   RSP +R  S  +  
Sbjct: 375 KATADGILHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRRAKSRWEPV 434

Query: 515 TLTSALRRMPLISSTVGRTN 574
                  ++ LIS    +TN
Sbjct: 435 VEEKVANKVELISKESAKTN 454


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,933,041
Number of Sequences: 37544
Number of extensions: 415155
Number of successful extensions: 1002
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)