Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_D09
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    36   0.051
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    36   0.051
U21310-2|AAA62521.1|  322|Caenorhabditis elegans T box family pr...    29   5.8  

>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 35.5 bits (78), Expect = 0.051
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
 Frame = +1

Query: 304 AGAQSKEEIREILGGGEAQEST--HTYGLLNQRYAXFDPKFLTVANKIYVSDQYKLADAF 477
           A  ++++EIR+ L  G   E    H   +            + VAN I+    + +   +
Sbjct: 52  AKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLY 111

Query: 478 -SRTANLFRSEVXNINFSAPKNAADIINRWADEQTQGHIK 594
            +    L+ +    +NF   + +A+ IN +  E T+GHIK
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIK 151


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 35.5 bits (78), Expect = 0.051
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
 Frame = +1

Query: 304 AGAQSKEEIREILGGGEAQEST--HTYGLLNQRYAXFDPKFLTVANKIYVSDQYKLADAF 477
           A  ++++EIR+ L  G   E    H   +            + VAN I+    + +   +
Sbjct: 52  AKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLY 111

Query: 478 -SRTANLFRSEVXNINFSAPKNAADIINRWADEQTQGHIK 594
            +    L+ +    +NF   + +A+ IN +  E T+GHIK
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIK 151


>U21310-2|AAA62521.1|  322|Caenorhabditis elegans T box family
           protein 11 protein.
          Length = 322

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 129 ERRRSTCSVMNSQGQDSAMPSTRPPCKILKESYNLADDKNVIASP 263
           +RRR   S + S+G  S    + PP K +K+      D +VI+ P
Sbjct: 186 DRRRERQSPVYSEGTSSEKSISPPPAKKIKDMAPALPDYSVISKP 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,186,723
Number of Sequences: 27780
Number of extensions: 331574
Number of successful extensions: 810
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)