Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_D08
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0003 + 29476-29847,30192-31519,31612-31722,31836-32112,322...    29   6.5  
02_05_1290 - 35500515-35500897,35501560-35502031,35502174-35502212     28   8.6  

>05_01_0003 + 29476-29847,30192-31519,31612-31722,31836-32112,
            32233-33714
          Length = 1189

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = -3

Query: 404  LS*VLCS**YFD*KFSMTLNI-ESHFSHTGLVFFNKWSTVLFSIFYNA 264
            +S ++C   Y +  F +TL + E++ S +G  F+N W+   +++F+ +
Sbjct: 904  ISAMICYFFYKNITFGVTLFLYEAYTSFSGQTFYNDWALSTYNVFFTS 951


>02_05_1290 - 35500515-35500897,35501560-35502031,35502174-35502212
          Length = 297

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 72  CELQTEKY*IELHHICEKTSEKWET 146
           CE++T+K   E    C+KT+ +WE+
Sbjct: 176 CEIETDKVKREKQGYCDKTNVEWES 200


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,959,370
Number of Sequences: 37544
Number of extensions: 311283
Number of successful extensions: 592
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)