Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_D08
         (880 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099919-12|AAC68797.1|   63|Caenorhabditis elegans Hypothetical...    67   2e-11
Z73427-8|CAA97804.1|  302|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U80440-3|AAK21470.2|  380|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>AF099919-12|AAC68797.1|   63|Caenorhabditis elegans Hypothetical
           protein F40G9.2 protein.
          Length = 63

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 29/35 (82%), Positives = 29/35 (82%)
 Frame = +3

Query: 243 TKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 347
           TKR RDACIIENGEE CG LIE HKACMR  GFNI
Sbjct: 29  TKRVRDACIIENGEEKCGKLIEAHKACMRAAGFNI 63


>Z73427-8|CAA97804.1|  302|Caenorhabditis elegans Hypothetical
           protein F58B3.8 protein.
          Length = 302

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
 Frame = -3

Query: 614 VKFNILPIPLAFSNIYNLINQRGSHE-----NSYKSNKQNCIFDLFTPTLLTT 471
           V FN+  IP+ F NIYN+  + G  E     NSY  N       L   T+++T
Sbjct: 60  VPFNVTRIPVNFDNIYNITIKCGKSEEDGKFNSYFKNSTPKYLGLTDTTIVST 112


>U80440-3|AAK21470.2|  380|Caenorhabditis elegans Hypothetical
           protein T21E12.2 protein.
          Length = 380

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 264 MHRVLFLFXGQAQQGFSLGFSTFSGAGPSKTLTSTALALAFPIFQRFFHI 115
           +H+V   F     +G ++GF+T S    S  ++      AF +FQ  F +
Sbjct: 82  VHKVSDFFVYLKTEGRTIGFNTLSSRDTSLLISQATNTTAFNMFQHSFSV 131


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,007,089
Number of Sequences: 27780
Number of extensions: 329099
Number of successful extensions: 740
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)