Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_D05
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 36 0.042
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 36 0.056
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.22
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 33 0.22
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 33 0.22
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.52
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.68
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.90
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 30 2.1
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 30 2.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.8
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 30 2.8
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.8
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.4
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 35.9 bits (79), Expect = 0.042
Identities = 24/69 (34%), Positives = 25/69 (36%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G GG G G GG G+G G G GG G G RG RG
Sbjct: 13 GGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGG-----GGGYGGGGYGGGGRGGGRG 67
Query: 756 EXXGXFXGR 730
G GR
Sbjct: 68 GSNGSAGGR 76
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = -1
Query: 933 GXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRGE 754
G G G + G GGG G G G R G GG G G G G
Sbjct: 2 GDRGYGGSRSYGGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGG 61
Query: 753 XXGXFXG 733
G G
Sbjct: 62 RGGGRGG 68
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 35.5 bits (78), Expect = 0.056
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = -1
Query: 933 GXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAG--GXQGXGXRGVXR 760
G G GG G + G GGG G+G G+R G G G +G G RG R
Sbjct: 9 GGGGGGFRGGRGGDRGG-SRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFR 67
Query: 759 GEXXGXFXG 733
G G G
Sbjct: 68 GGRGGGDRG 76
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 870 GXXGGGXXG-FGXGERXXRVXGKXAGGXQGXGXRGVXRGEXXGXFXGR 730
G GGG G FG G+R G GG +G G RG G G F GR
Sbjct: 36 GGYGGGDRGSFGGGDRGG-FRGGRGGGDRG-GFRGGRGGGDRGGFGGR 81
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G GG G G GGG G G G G GG G G G G
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSG 145
Query: 756 EXXGXFXG 733
G G
Sbjct: 146 GCGGGSSG 153
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = -1
Query: 933 GXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRGE 754
G G GG G G GGG G G G G GG G G G G
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGG 119
Query: 753 XXGXFXG 733
G G
Sbjct: 120 GGGGCGG 126
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXG 778
GG G GG G G GGG G G G GG G G
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGG 87
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G GG G G GGG G G G G GG G G G G
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSG 145
Query: 756 EXXGXFXG 733
G G
Sbjct: 146 GCGGGSSG 153
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = -1
Query: 933 GXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRGE 754
G G GG G G GGG G G G G GG G G G G
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGG 119
Query: 753 XXGXFXG 733
G G
Sbjct: 120 GGGGCGG 126
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXG 778
GG G GG G G GGG G G G GG G G
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGG 87
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G GG G G GGG G G G + G GG G G G G
Sbjct: 53 GGGGGGGGGGGGGFGGGNG-GFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGG 111
Query: 756 EXXGXFXG 733
G G
Sbjct: 112 NQGGGGGG 119
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G GG G G GGG G+G G G G G G G G
Sbjct: 101 GGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGG 160
Query: 756 EXXGXFXG 733
+ G G
Sbjct: 161 DFGGYGGG 168
Score = 31.9 bits (69), Expect = 0.68
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRG 769
GG G GG G G G G GFG G G GG G G G
Sbjct: 157 GGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGG 212
Score = 31.5 bits (68), Expect = 0.90
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRG 769
GG G GG G G GGG G G G G GG G G G
Sbjct: 172 GGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSG 227
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRG 769
GG G GG G G G G G+G G G GG G G G
Sbjct: 121 GGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYG 176
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G GG G G GGG G+G G G G G G G+ G
Sbjct: 116 GGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGG--GGGGGGDFGGYGGGGMGGG 173
Query: 756 EXXGXFXG 733
G G
Sbjct: 174 GYGGGGDG 181
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G GG G G GGG G G G G GG G G G G
Sbjct: 133 GGGGYGGMGGGPGGYGMGGYGGGGGGGGDFG-GYGGGGMGGGGYGGGGDGGYGGGGFGGG 191
Query: 756 EXXGXFXG 733
G G
Sbjct: 192 GMGGYGGG 199
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G GG G G GGG G G G + G GG G G G
Sbjct: 111 GGGYGGGGYGGGGDGGGGY--GGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGG 168
Query: 756 EXXGXFXG 733
G G
Sbjct: 169 GMGGGGYG 176
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G GG G G GGG G+G G G GG G G G G
Sbjct: 154 GGGGGGGDFGGYGGGGMGG--GGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMG 211
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G GG G G GGG G G G G GG G G G G
Sbjct: 97 GGYGGGGDFGG-GMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGG 155
Query: 756 EXXGXFXG 733
G G
Sbjct: 156 GGGGGDFG 163
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.52
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G GG G G GGG G G G G GG G G G G
Sbjct: 125 GGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGG 184
Query: 756 EXXG 745
G
Sbjct: 185 GCGG 188
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.68
Identities = 24/69 (34%), Positives = 25/69 (36%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G G G G GGG G G G R G+ GG G G RG G
Sbjct: 70 GGWGNNGGGGNWGGNGGGGNGGGGRGGG--GGGGGGRGGGGGGRGGGGG-GGGGRGGGGG 126
Query: 756 EXXGXFXGR 730
G GR
Sbjct: 127 GRGGGGRGR 135
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
G G GG G G GGG G G G G+ GG G G G G
Sbjct: 61 GSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGG-GRGGGGGGGG 119
Query: 756 EXXGXFXGR 730
G GR
Sbjct: 120 GRGGGGGGR 128
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXX--GFGXGERXXRVXGKXAGGXQGXGXRGVX 763
GG GG G G GGG G G G G GG G G G
Sbjct: 51 GGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGG 110
Query: 762 RGEXXGXFXGR 730
RG G GR
Sbjct: 111 RGGGGGGGGGR 121
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = +3
Query: 756 PPXXPPSCXXPXXHLPXYRXPXPPFPPXRTXGXLLLXPPXXXPXXXXXXPPPXGXXXXTP 935
PP PP C P P P P PP + PP P PPP +P
Sbjct: 31 PPPPPPMCAPPPLPCP----PPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQG 784
GG G GG G GGG G+G G G+ GG QG
Sbjct: 183 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGG-WGQQGGGGQG 232
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQG 784
GG G GG G GGG G+G G G+ GG QG
Sbjct: 221 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGG-WGQQGGGGQG 270
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +1
Query: 760 PXNPPXAXPLXPTCPLTXXPXXXXXXXXXXXXSSXXPPXXXPXXXXXXPPXXAXXPXPPX 939
P PP P+ P P T P PP P PP P PP
Sbjct: 264 PPPPPSVTPMPPPMPPT--PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Query: 940 P 942
P
Sbjct: 322 P 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +1
Query: 760 PXNPPXAXPLXPTCPLTXXPXXXXXXXXXXXXSSXXPPXXXPXXXXXXPPXXAXXPXPPX 939
P PP P+ P P T P PP P PP P PP
Sbjct: 274 PPPPPSVTPMPPPMPPT--PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Query: 940 P 942
P
Sbjct: 332 P 332
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -3
Query: 871 GGXRRRXPXVRXGGKGGXGXR*XGRWXXGXXXEGGXQGG 755
GG R R R G +GG G GR G GG +GG
Sbjct: 150 GGGRGRGGRGRGGDRGGRGSDRGGRGGFGRGGGGGFRGG 188
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/69 (31%), Positives = 24/69 (34%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRG 757
GG G GG G G GGG GF G+R G G G G R
Sbjct: 172 GGRGGFGRGGGGGFRGGDR---GGFGGGRGGFRGGDRGG-FRGGRGGDFGGRGRGDFKRS 227
Query: 756 EXXGXFXGR 730
G F G+
Sbjct: 228 YDGGSFGGQ 236
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = -1
Query: 933 GXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRGE 754
G G GG G G GGG G G + G GG G G G G
Sbjct: 75 GGGRGGGRGGNGGFGDNGGLRGGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGG 134
Query: 753 XXGXFXGR 730
G GR
Sbjct: 135 RGGNGGGR 142
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRG 769
GG G GG G G GGG G G G G GG G G
Sbjct: 87 GGGCGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSGG 142
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -1
Query: 909 GGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRGEXXG 745
GG G G GGG G G G G GG G G G G G
Sbjct: 88 GGCGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSGG 142
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = -3
Query: 907 GGXXXXXXGXXXGGXRRRXPXVRXGGKGGXGXR*XGRWXXGXXXEGGXQGGXXWD 743
GG G G R GG+GG G GR +G +GG WD
Sbjct: 92 GGFGGSRGGGGYDGGRGGSRGGYDGGRGGYGGDRGGRGGGRGGYDGERRGGSRWD 146
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Frame = -1
Query: 936 GGXXXXGXXGGXGXXXXXXTXXGXXGGGXXGFGX--GERXXRVX-GKXAGGXQGXGXRGV 766
GG G GG G G GG G G G R G GG +G G RG
Sbjct: 44 GGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGD 103
Query: 765 XRGEXXG 745
G G
Sbjct: 104 WGGNNNG 110
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = +3
Query: 756 PPXXPPSCXXPXXHLPXYRXPXPPFPPXRTXGXLLLXPPXXXPXXXXXXPPP 911
PP PP+ +P P PP PP + +L PP P P P
Sbjct: 1358 PPPPPPTMSKAPTGVPL---PVPPPPPLFSPSMILPPPPPPLPSEEKKNPLP 1406
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = -1
Query: 918 GXXGGXGXXXXXXTXXGXXGGGXXGFGXGERXXRVXGKXAGGXQGXGXRGVXRGEXXGXF 739
G GG G + G GGG G G GG G G G G G
Sbjct: 784 GSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAG 843
Query: 738 XG 733
G
Sbjct: 844 DG 845
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,598,340
Number of Sequences: 27780
Number of extensions: 250565
Number of successful extensions: 879
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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