Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_D01
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0197 + 6337212-6337278,6339261-6340517,6340599-6340626,634...    30   2.9  
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668...    30   2.9  
04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.8  
05_03_0030 + 7529814-7530257,7530409-7530462,7531605-7532793,753...    29   5.0  
05_01_0564 - 4919294-4919391,4919491-4919620,4919700-4919789,491...    29   6.6  
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626...    28   8.8  

>03_02_0197 +
           6337212-6337278,6339261-6340517,6340599-6340626,
           6340735-6340897
          Length = 504

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = +1

Query: 286 MKAYENFMMMYKVGFLPKNLEFSIFYE-KMREEAIALFKLFYYAKDFECFYKTACYARVY 462
           +  Y  +  M   G +P  L++++F      +EA+    L +Y   F+     A +A  Y
Sbjct: 197 LNVYPYYDYMRSNGVIP--LDYALFRPLPPNKEAVDANTLLHYTNVFDAVVDAAYFAMAY 254

Query: 463 MNQGNVLIRLLHSYYPAAPTP 525
           +N  NV + +  + +P    P
Sbjct: 255 LNVTNVPVMVTETGWPHKGDP 275


>01_05_0501 +
           22764978-22765896,22766087-22766349,22766613-22766836,
           22767419-22767749,22767968-22768372
          Length = 713

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 541 GRTKLAVSEPLDNSYVVGV*EHSPGSCRLWRSMLFCRNIQN 419
           G T L++S+  D      + E S G   +WR+M  C  +QN
Sbjct: 445 GLTCLSISKLRDEELYPQIIELSAGLVHMWRNMYECHQVQN 485


>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 264  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 362
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>05_03_0030 +
           7529814-7530257,7530409-7530462,7531605-7532793,
           7532861-7533522
          Length = 782

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +2

Query: 425 NVSTKQHATPEST*TRGMFLYAYYIAIIQRLRHRQLRSTWL 547
           NV+ K+  +PES   +GM  +   +AI+  +RHR L  TWL
Sbjct: 516 NVAIKR-ISPESK--QGMKEFMSEVAILGNVRHRSLSVTWL 553


>05_01_0564 -
           4919294-4919391,4919491-4919620,4919700-4919789,
           4919882-4919987,4920087-4920187,4920347-4920442,
           4920549-4920648,4920761-4920897,4920980-4921111,
           4921222-4921320,4921397-4921594,4921715-4921892,
           4922020-4922075,4922168-4922320,4922422-4922514,
           4922605-4922706,4922817-4922878,4922995-4923090,
           4923354-4923453,4923546-4923617,4923728-4923775,
           4923853-4923996
          Length = 796

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 511 AAPTPPTSFYLAPYEAYPQYFVNMEVXNKM 600
           AAP PP+   L PY  +PQ   N++V  ++
Sbjct: 215 AAPAPPSEEELNPYSIFPQPEENLKVHTEI 244


>10_08_0683 -
           19860777-19861070,19861677-19861874,19862498-19862659,
           19862763-19862911,19863089-19863236,19863317-19863385,
           19863471-19863719,19863937-19864131,19864444-19864560,
           19864978-19866537
          Length = 1046

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
 Frame = +1

Query: 496 HSYYPAAPTPPTSF----YLAPYEAYPQY 570
           H+Y P  P PP+ +    Y AP  AYP Y
Sbjct: 83  HAYPPPQPHPPSPYVYDPYHAPAAAYPSY 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,349,176
Number of Sequences: 37544
Number of extensions: 403531
Number of successful extensions: 942
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)