Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_C22
(993 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 1e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.007
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.009
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.047
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.19
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.44
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.58
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.0
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.3
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 29 1.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 1.8
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 1.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.8
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 24 2.4
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 7.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 7.2
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/55 (40%), Positives = 23/55 (41%)
Frame = +3
Query: 576 LLLFXPPXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTP 740
LLL PP P P P P P PP +P G P PP PP PP P
Sbjct: 727 LLLKSPPPPPPAVIVPTPAPAPIPVPPP--APIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 32.3 bits (70), Expect = 0.11
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSP--PXXGXPTPPLPPXP 713
PP P PP PPP P PP S P P P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 29.9 bits (64), Expect = 0.58
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +2
Query: 266 PPPWGGXXGXPXKKTHPGGXXXXPPPPKXXPQXNXXSSGXPPXPPPPXSRPXP 424
PPP G P PG PPPP P + G P P + P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA-VSAGGSRYYAPAPQAEPEP 803
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
Frame = +1
Query: 385 PPPPPPPXXS---PXPPXP 432
PPPPPPP + P PP P
Sbjct: 762 PPPPPPPGVAGAGPPPPPP 780
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 338 PPPKXXPQXNXXSSGXPPXPPPP 406
P P P G PP PPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPP 768
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = +3
Query: 594 PXPXPPTXXKXXXPP----PXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTPS 743
P PP + PP P P PP PP PP+P P P PP P+
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPS--APPMPAGPPSAPPPPLPA 1737
Score = 33.1 bits (72), Expect = 0.062
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPP-XXGXPTPPLPPXP-XXXPXPPTP 740
PP PT PPP PP +PP G P+ P PP P P P P
Sbjct: 1699 PPQMSAPTPP----PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/64 (26%), Positives = 21/64 (32%)
Frame = +1
Query: 241 KKXGGXXXPPPLGGXXXXPXXKNXPRGAVXXXPPPKXGAXKXXXXFXXPPPPPPPXXSPX 420
K GG P+ P P+ + PPP PP P P +P
Sbjct: 1676 KLFGGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPP---SAPPMPAGPPSAPP 1732
Query: 421 PPXP 432
PP P
Sbjct: 1733 PPLP 1736
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 308 THPGGXXXXPPPPKXXPQXNXXSSGXPPXPPPP 406
T P PPPP P +G P PPPP
Sbjct: 1706 TPPPPPMSVPPPPSAPPM----PAGPPSAPPPP 1734
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.007
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXP-XPPTPS 743
PP P PP+ PP P + P +PP P PP P P PP P+
Sbjct: 415 PPVPTPPSL-----PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPA 461
Score = 36.3 bits (80), Expect = 0.007
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPT-PPLPPXPXXXPXPPTPS 743
PP P PP P + P P G P PPLPP P P P+
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Score = 33.5 bits (73), Expect = 0.047
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXP--PPXPXAPPXFSPPXXGXPTPPLPP 707
PP P P P PP P AP +P PPLPP
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294
Score = 31.9 bits (69), Expect = 0.14
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 6/56 (10%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPP-----PXPXAPPXFSPPXXGXP-TPPLPPXPXXXPXPPTP 740
PP P PP+ PP PP PP + PLPP P PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 30.7 bits (66), Expect = 0.33
Identities = 24/85 (28%), Positives = 25/85 (29%), Gaps = 7/85 (8%)
Frame = +2
Query: 203 PPQXXGGGALXKKKKXXGXXXPPPWGGXXGXPXKKTHPGGXXXXPPPPKXXPQXNXXSS- 379
PP A K PPP G P PPPP P+ N S
Sbjct: 294 PPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP--PRSNAAGSI 351
Query: 380 ------GXPPXPPPPXSRPXPXHXP 436
P PPPP S P P
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQP 376
Score = 29.9 bits (64), Expect = 0.58
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +2
Query: 314 PGGXXXXPPPPKXXPQXNXXSSGXPPXPPPPXSRPXPXHXPXXKXXXP 457
P G PP P P +G P PP P + P P P P
Sbjct: 440 PMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 29.5 bits (63), Expect = 0.77
Identities = 20/79 (25%), Positives = 25/79 (31%), Gaps = 6/79 (7%)
Frame = +1
Query: 199 LPPP--KXGGXGXKXKKKXGGXXXPPPLGGXXXXPXXKNXPRGAVXXXPPPKX----GAX 360
LPPP + KK PP P ++ PPP G+
Sbjct: 292 LPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSI 351
Query: 361 KXXXXFXXPPPPPPPXXSP 417
PPPPPP +P
Sbjct: 352 PLPPQGRSAPPPPPPRSAP 370
Score = 27.1 bits (57), Expect = 4.1
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXP-PPX----PXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTP 740
PP P P + P PP P PP S P G PPL PP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPL-SSSRAVSNPPAP 391
Score = 25.8 bits (54), Expect = 9.5
Identities = 20/84 (23%), Positives = 26/84 (30%), Gaps = 12/84 (14%)
Frame = +2
Query: 203 PPQXXGGGALXKKKKXXGXXXPPP-----WGGXXGXPXKKTHPGGXXXXPPP-------P 346
PP+ G++ + PPP G P + PPP P
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP 401
Query: 347 KXXPQXNXXSSGXPPXPPPPXSRP 418
P N + PP P PP P
Sbjct: 402 ALPPLGNASRTSTPPVPTPPSLPP 425
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.9 bits (79), Expect = 0.009
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPP 734
PP P PPP A P SPP +PP P P PP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 33.5 bits (73), Expect = 0.047
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFS-PPXXGXPTPPL----PPXPXXXPXPPTPS 743
P P PPT PP APP S PP PP+ PP P P P P+
Sbjct: 125 PSAPAPPTPQSELRPPTS--APPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPA 178
Score = 29.9 bits (64), Expect = 0.58
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPX-APPXFS--PPXXGXPTPPLPPXPXXXPXPPTPS 743
PP PP + PPP P APP S PP PP P P PS
Sbjct: 139 PPTSAPP---RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXP 713
PP P K PP P P P P PPL P
Sbjct: 172 PPPAQPAAPVKS--PPSAPSLPSAVPPMPPKVPPPPLSQAP 210
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.047
Identities = 21/74 (28%), Positives = 22/74 (29%)
Frame = +2
Query: 203 PPQXXGGGALXKKKKXXGXXXPPPWGGXXGXPXKKTHPGGXXXXPPPPKXXPQXNXXSSG 382
P G K P P G P P PPP P S G
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK----PAAGVPPVPPPSEAPPVPKPSVG 1206
Query: 383 XPPXPPPPXSRPXP 424
PP PPP + P P
Sbjct: 1207 VPPVPPPSTAPPVP 1220
Score = 32.7 bits (71), Expect = 0.083
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPX--PXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTPS 743
PP P P + P P PP P P+ +PP P PP P+
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Score = 32.7 bits (71), Expect = 0.083
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTPS 743
PP P P P P P P P G P P+PP P P PTPS
Sbjct: 1179 PPVPKPAAGVP---PVPPPSEAPPVPKPSVGVP--PVPP-PSTAPPVPTPS 1223
Score = 31.5 bits (68), Expect = 0.19
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPPXX--GXPTPPLPPXPXXXPXPPTPS 743
PP PP PP P PP +PP PP+P P P PS
Sbjct: 1193 PPSEAPPVPKPSVGVPPVP--PPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 31.1 bits (67), Expect = 0.25
Identities = 17/56 (30%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFS-----PPXXGXPTPPLPPXPXXXPXPPTPS 743
PP P P T P P P S PP P+ +P P PP P+
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPA 1087
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +2
Query: 269 PPWGGXXGXPXKKTHPGGXXXXPPPPKXXPQXNXXSSGXPPXPPPPXSRPXP 424
PP G P P P P ++G PP PPP + P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 30.3 bits (65), Expect = 0.44
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +3
Query: 594 PXPXPPTXXKXXXPPPXPXAPPXFSP-PXXGXPTPPLPPXPXXXPXPPTPS 743
P PP PP P P P PP+PP P P P PS
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP-PSEAPPVPKPS 1204
Score = 29.9 bits (64), Expect = 0.58
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 5/56 (8%)
Frame = +3
Query: 591 PPXPXP----PTXXKXXXPPPXPXAPPXFSP-PXXGXPTPPLPPXPXXXPXPPTPS 743
PP P P P+ PP P AP P P PP+P P P PS
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVP-APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPS 1118
Score = 29.9 bits (64), Expect = 0.58
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = +1
Query: 202 PPPKXGGXGXKXKKKXGGXXXPPPLGGXXXXPXXKNXPRGAVXXXPPPKXGAXKXXXXFX 381
P P G K P P G P K P A P P G
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAP---PVPK--PSVAAPPVPAPSSGIPPVPKPAA 1186
Query: 382 XPPPPPPPXXSPXPPXP 432
PP PPP +P P P
Sbjct: 1187 GVPPVPPPSEAPPVPKP 1203
Score = 29.1 bits (62), Expect = 1.0
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSP---PXXGXPTPPLPPXPXXXPXPPTP 740
PP P P + P P PP +P P P+ PP P PP P
Sbjct: 1092 PPVPKP-SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 338 PPPKXXPQXNXXSSGXPPXPPPPXSRP 418
PPP P S+G PP P P P
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +3
Query: 594 PXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTPS 743
P PP PP P P PP+P P P PS
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPS 1137
Score = 27.5 bits (58), Expect = 3.1
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSP-PXXGXPTPPLPPXPXXXPXPPTPS 743
P PP PP P AP P P PP+P P P P PS
Sbjct: 1097 PSVAAPPVPKPSVAVPPVP-APSGAPPVPKPSVAAPPVP-VPSGAPPVPKPS 1146
Score = 27.5 bits (58), Expect = 3.1
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +3
Query: 594 PXPXPPTXXKXXXPPPXPXAPPXFSP-PXXGXPTPPLPPXPXXXPXPPTPS 743
P PP PP P AP P P PP+P P P P+
Sbjct: 1136 PSGAPPVPKPSVAAPPVP-APSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Score = 27.1 bits (57), Expect = 4.1
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 7/58 (12%)
Frame = +3
Query: 591 PPXPXPP-TXXKXXXPPPXPXAPPXFSPPXXGXPTPPLP------PXPXXXPXPPTPS 743
PP P P T P APP P P+ P P P P P P PS
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPS 1098
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTPS 743
P PP PP P P PP+P P P PS
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Score = 26.6 bits (56), Expect = 5.4
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTPS 743
PP P P P P APP P PP+P P P PS
Sbjct: 1150 PPVPAPS--GAPPVPKPSVAAPPV---PAPSSGIPPVPKPAAGVPPVPPPS 1195
Score = 26.2 bits (55), Expect = 7.2
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTPS 743
PP P P P P APP P PP+ P P P P PS
Sbjct: 1083 PPVPAPSGIPPV--PKPSVAAPPV---PKPSVAVPPV-PAPSGAPPVPKPS 1127
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 314 PGGXXXXPPPPKXXPQXNXXSSGXPPXPPPPXSRPXP 424
P G P P P S PP P P + P P
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 594 PXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTPS 743
P PP PP P P PP+P P P P PS
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA-PSGAPPVPKPS 1165
Score = 26.2 bits (55), Expect = 7.2
Identities = 21/76 (27%), Positives = 22/76 (28%)
Frame = +1
Query: 205 PPKXGGXGXKXKKKXGGXXXPPPLGGXXXXPXXKNXPRGAVXXXPPPKXGAXKXXXXFXX 384
P G K G PPP P K P V PPP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPP---SEAPPVPK--PSVGVPPVPPPSTAPPVPTPSAGL 1226
Query: 385 PPPPPPPXXSPXPPXP 432
PP P P +P P P
Sbjct: 1227 PPVPVPTAKAPPVPAP 1242
Score = 25.8 bits (54), Expect = 9.5
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSP--PXXGXPTPPLPPXPXXXPXPPTPS 743
PP PP+ P AP P P PP+P P P PS
Sbjct: 986 PPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPS 1038
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXP 731
PP P P P P P P P P P P P P
Sbjct: 1121 PPVPKPSVAAP---PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.19
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 636 PPXPXAPPXFSPPXXGXPTPPLPP 707
PP P PP F PP P PP PP
Sbjct: 9 PPPPPPPPGFEPP--SQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.8
Identities = 11/18 (61%), Positives = 11/18 (61%), Gaps = 2/18 (11%)
Frame = +1
Query: 385 PPPPPPPXXSP--XPPXP 432
PPPPPPP P PP P
Sbjct: 10 PPPPPPPGFEPPSQPPPP 27
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 335 PPPPKXXPQXNXXSSGXPPXPPPP 406
PPPP P S PP PPPP
Sbjct: 9 PPPPPPPPGFEPPSQ--PPPPPPP 30
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 3/19 (15%)
Frame = +1
Query: 385 PPPPPP---PXXSPXPPXP 432
PPPPPP P P PP P
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 3/23 (13%)
Frame = +1
Query: 385 PPPPP---PPXXSPXPPXPXAXK 444
PPPPP PP P PP P K
Sbjct: 12 PPPPPGFEPPSQPPPPPPPGYVK 34
Score = 26.2 bits (55), Expect = 7.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 385 PPPPPPPXXSPXPPXP 432
PPPPPPP P P
Sbjct: 9 PPPPPPPPGFEPPSQP 24
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.3 bits (65), Expect = 0.44
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 739 GVGGXGXXXGX--GGRGGVGXPXXGGEKXGGAXGXGGG 632
G GG G G G RGG G GG G G GGG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -3
Query: 739 GVGGXGXXX-GXGGRGGVGXPXXGGEKXGGAXGXGGG 632
G GG G G RGG G GG + G G GG
Sbjct: 153 GFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.58
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 654 PPXFSPPXXGXPTPPLPPXPXXXPXPPTP 740
PP F PP P LP P PP P
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 338 PPPKXXPQXNXXSSGXPPXPPPP 406
PP P + S PP PPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPP 195
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +3
Query: 645 PXAPPXFSPPXXG-XPTPPLPPXPXXXP 725
P PP ++P P PP PP P P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 322 AVXXXPPPKXGAXKXXXXFXXPPPPPPPXXSP 417
AV PP K PPPPPPP P
Sbjct: 218 AVSPEIPPTY-TPKQADPLPAPPPPPPPTLPP 248
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.1 bits (62), Expect = 1.0
Identities = 25/78 (32%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = -1
Query: 423 GXGRXXGGGGXGGXPEXXXXFXG-XXFGGGGXXHXPPGXVFXXGXPXXPPQGGGXXXPXX 247
G G GGG GG P F G FGG G H G GG P
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 246 F---FFXFXAPPPXFWGG 202
F F P F GG
Sbjct: 247 FGGGLGGFGGGPGGFGGG 264
Score = 27.1 bits (57), Expect = 4.1
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -3
Query: 739 GVGGXGXXXGXGGRGGVGXPXXGGEKXGGAXGXGGGXXXFXXVGGXGXGG 590
G GG G G G GG G G GG G GG G G GG
Sbjct: 222 GHGGFGGGPG-GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +3
Query: 594 PXPX-PPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPPT 737
P P PP + P P PP P P P PP P P P T
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP-NEPVPET 149
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +3
Query: 600 PXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTPS 743
P P + PPP P P + P P+P LP P P P P+
Sbjct: 144 PLPVSCQPVLRPPPVPQVPSHWYP--VSLPSPNLPHQPISKP-PVIPN 188
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -3
Query: 739 GVGGXGXXXGX--GGRGGVGXPXXGGEKXGGAXGXGGGXXXFXXVGGXGXGGXK 584
G GG G GGRGG GG + GG G GG G G GG K
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGAR-GGRGGRGGARGGRGGSSG-GRGGAK 68
Score = 25.8 bits (54), Expect = 9.5
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 739 GVGGXGXXXGXGGRGGVGXPXXGGEKXGGAXGXGGG 632
G G G G GGRGG G GG G GG
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGSS--GGRGGAKGG 70
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTP 740
P P P + P P AP +P P PP+ P P P P
Sbjct: 560 PQRPAVPVVPEALSVPQPPVAP--VAPEVPSVPQPPVAPVVPEAPSVPQP 607
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/50 (28%), Positives = 16/50 (32%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXPPPXPXAPPXFSPPXXGXPTPPLPPXPXXXPXPPTP 740
P P P + P P P P P PP+ P P P P
Sbjct: 545 PQRPAAPVVPEAPSVPQRPAVPVV--PEALSVPQPPVAPVAPEVPSVPQP 592
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 633 PPPXPXAPPXFSPPXXGXPTPPLPP 707
PPP P A P PP PT LPP
Sbjct: 1883 PPPPPMALPKAGPPSAA-PTSALPP 1906
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 388 PPPPPPXXSPXPPXPXAXKTXXXP 459
PPPPPP P P A T P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALP 1905
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 24.2 bits (50), Expect(2) = 2.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 376 FXXPPPPPPP 405
+ PPPPPPP
Sbjct: 368 YSPPPPPPPP 377
Score = 21.8 bits (44), Expect(2) = 2.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 385 PPPPPPPXXSPXP 423
PPPPPP + P
Sbjct: 372 PPPPPPELLNHSP 384
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/53 (30%), Positives = 17/53 (32%), Gaps = 3/53 (5%)
Frame = +3
Query: 591 PPXPXPPTXXKXXXP--PPXPXAPPXFSPPXXGXP-TPPLPPXPXXXPXPPTP 740
P P P P PP PP P G P P +P P P P
Sbjct: 509 PGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPPGAP 561
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 7.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 376 FXXPPPPPPPXXS 414
F PPPPPPP S
Sbjct: 944 FPPPPPPPPPLVS 956
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,767,306
Number of Sequences: 5004
Number of extensions: 29722
Number of successful extensions: 526
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 513276802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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