Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_C19
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024776-21|AAK68479.1| 65|Caenorhabditis elegans Ribosomal pr... 54 2e-07
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 36 0.052
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 33 0.28
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.37
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.37
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.37
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.49
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.49
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 32 0.65
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 31 0.85
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.1
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 1.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.0
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 2.6
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 3.4
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.4
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 3.4
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 3.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 4.5
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 6.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 6.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 7.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 7.9
>AC024776-21|AAK68479.1| 65|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 28 protein.
Length = 65
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/33 (75%), Positives = 29/33 (87%), Gaps = 1/33 (3%)
Frame = +2
Query: 188 QCTQVKVEFIGE-TSRQIIRNVKGPVRDGDILT 283
QCTQV+VEFI + +R IIRNVKGPVR+GDILT
Sbjct: 21 QCTQVRVEFINDQNNRSIIRNVKGPVREGDILT 53
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1
Query: 124 MDKPNVLARVVKVLGRTGSQG 186
MDK LARV KV+GRTGSQG
Sbjct: 1 MDKLT-LARVTKVIGRTGSQG 20
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
P P R P PPP P P P P PP PP
Sbjct: 538 PEPSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPP 576
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXP 896
PPP P GP P P P P PPP P
Sbjct: 90 PPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 778 PXPPPGKXAXXXXGPLXXPXPXXXXAXXPXXLXXPLPPPP 897
P PPP A GP P P P P PPPP
Sbjct: 88 PLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXP 896
PPP P GPPP P P P P P P
Sbjct: 95 PPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQP 132
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXP 896
PPP P GPPP P P P P P P
Sbjct: 95 PPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQP 132
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXP 896
PPP P GPPP P P P P P P
Sbjct: 95 PPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQP 132
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 786 PPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PP P PPP P P P PPP PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P G PP P P P PPP PP
Sbjct: 713 PPPPPGLPPITGGPPPPP---PPGGLPPITGGPPPPPPP 748
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P G PP P P P PPP PP
Sbjct: 742 PPPPP---PPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P G PP P P P PPP PP
Sbjct: 729 PPPPGGLPPITGGPPPPP---PPGGLPPISGGPPPPPPP 764
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPX------PXPXXXXXXPPPXPP 899
PPP GPPP P P P P PPP PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 7/46 (15%)
Frame = +3
Query: 783 PPPXEXRXPXXG---PPPXXPXXXXPXPXPXXXXXX----PPPXPP 899
PPP P G PPP P P P P PPP PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 786 PPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PP P PPP P P P PPP PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P G PP P P P PPP PP
Sbjct: 713 PPPPPGLPPITGGPPPPP---PPGGLPPITGGPPPPPPP 748
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P G PP P P P PPP PP
Sbjct: 742 PPPPP---PPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P G PP P P P PPP PP
Sbjct: 729 PPPPGGLPPITGGPPPPP---PPGGLPPISGGPPPPPPP 764
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPX------PXPXXXXXXPPPXPP 899
PPP GPPP P P P P PPP PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 7/46 (15%)
Frame = +3
Query: 783 PPPXEXRXPXXG---PPPXXPXXXXPXPXPXXXXXX----PPPXPP 899
PPP P G PPP P P P P PPP PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 786 PPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PP P PPP P P P PPP PP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P G PP P P P PPP PP
Sbjct: 296 PPPPPGLPPITGGPPPPP---PPGGLPPITGGPPPPPPP 331
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P G PP P P P PPP PP
Sbjct: 325 PPPPP---PPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P G PP P P P PPP PP
Sbjct: 312 PPPPGGLPPITGGPPPPP---PPGGLPPISGGPPPPPPP 347
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPX------PXPXXXXXXPPPXPP 899
PPP GPPP P P P P PPP PP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 7/46 (15%)
Frame = +3
Query: 783 PPPXEXRXPXXG---PPPXXPXXXXPXPXPXXXXXX----PPPXPP 899
PPP P G PPP P P P P PPP PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.49
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +3
Query: 783 PPPXEXRXPXXGPP--PXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP R P GP P P P P P PPP PP
Sbjct: 348 PPPPPPRYPSAGPGMYPPPPPSRPPAP-PSGHGMIPPPPPP 387
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P P P P P P PPP PP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP 302
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP R P PPP P P P PP PP
Sbjct: 336 PPPPGMRYPGGMPPPPPPRY--PSAGPGMYPPPPPSRPP 372
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 778 PXPPPGKXAXXXXGPLXXPXPXXXXAXXPXXLXXPLPPPP 897
P PPPG+ P P P P P PPPP
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXP 896
PPP P PPP P P P P PPP P
Sbjct: 289 PPPSSGMWP---PPPPPPPGRTPGP-PGMPGMPPPPPP 322
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P PP P P PPP PP
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.49
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +3
Query: 783 PPPXEXRXPXXGPP--PXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP R P GP P P P P P PPP PP
Sbjct: 358 PPPPPPRYPSAGPGMYPPPPPSRPPAP-PSGHGMIPPPPPP 397
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P P P P P P PPP PP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP 312
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP R P PPP P P P PP PP
Sbjct: 346 PPPPGMRYPGGMPPPPPPRY--PSAGPGMYPPPPPSRPP 382
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 778 PXPPPGKXAXXXXGPLXXPXPXXXXAXXPXXLXXPLPPPP 897
P PPPG+ P P P P P PPPP
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXP 896
PPP P PPP P P P P PPP P
Sbjct: 299 PPPSSGMWP---PPPPPPPGRTPGP-PGMPGMPPPPPP 332
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P PP P P PPP PP
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GGG G GGG
Sbjct: 234 GGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGG 272
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 63 ETRQLWCTCVNCIKLDITSQNG*TQRSCSCREST 164
ETRQ C C ++ + Q Q SCSC+ ST
Sbjct: 22 ETRQASCGCAQSVQPTCSCQQASQQYSCSCQPST 55
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Frame = +3
Query: 783 PPPX---EXRXPXXGPPPXX-PXXXXPXPXPXXXXXXPPPXPP 899
PPP + P PPP P P P P PPP PP
Sbjct: 97 PPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPP 139
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP R P PPP P P P PP PP
Sbjct: 139 PPPPPPRVPRT-PPPRSPPPRRPPMTPPSPQRRPPRTPP 176
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP + R PPP P P P PP P
Sbjct: 126 PPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTP 164
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Frame = +3
Query: 783 PPPXEXRXPXX-GPPPXXPXXXXPXPXPXXXXXXPPPXP 896
PPP R P PPP P P P P P P
Sbjct: 142 PPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GGG G + GGG
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGG 91
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GGG G GGG
Sbjct: 70 GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGG 108
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GGG G GGG
Sbjct: 143 GGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 181
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GG G GGG
Sbjct: 66 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 104
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 895 GXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
G GGG G G G G GGG G GGG
Sbjct: 123 GGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGG 160
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GG G GGG
Sbjct: 123 GGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGG 161
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GGG G GGG
Sbjct: 93 GGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGG 131
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GGG G GGG
Sbjct: 104 GGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GG G GGG
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 895 GXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
G GGG G G G G GGG G GGG
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGG 162
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G GGG G GGG
Sbjct: 132 GGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGG 170
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GGG G GG
Sbjct: 111 GGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG 149
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GGG G GGG
Sbjct: 104 GGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GG G GGG
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 895 GXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
G GGG G G G G GGG G GGG
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGG 162
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G GGG G GGG
Sbjct: 132 GGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGG 170
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GGG G GG
Sbjct: 111 GGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG 149
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPP--XXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P PP P P P P PPP PP
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +3
Query: 783 PPPXEXRXPXXG--PPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P PPP P P P P PPP PP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPP-PMCPPPPPPPPPP 72
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 786 PPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXP 896
PP P PPP P P P PPP P
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGG 785
GG GGG G G G + G GGG G GG
Sbjct: 78 GGYGGGHGGAAVGGGYGGAVGGGGGGGYGGGHGGGHGG 115
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXG 806
GG GGG G G G + G GGG G
Sbjct: 98 GGGGGGGYGGGHGGGHGGAVGGGYGGGGGGG 128
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GGG G G G
Sbjct: 809 GGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNG 847
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GGG G + GGG
Sbjct: 788 GGGGGGNGGSGGGGGGGGGGSGGSGGG---GSNSNSGGG 823
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 895 GXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
G GGG G G G GGG G R GGG
Sbjct: 63 GWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGG 100
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G G GGG G R GGG
Sbjct: 92 GGRGGG---GGGGGGRGGGGGGRGGGGGGGGGRGGGGGG 127
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G + G GGG G + GGG
Sbjct: 78 GGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGGG 116
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G + G GGG G GGG
Sbjct: 130 GGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGG 168
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 822 PPXXPXXXXPXPXPXXXXXXPPPXPP 899
PP P P P P PPP PP
Sbjct: 125 PPNPPRTCCPPPTPAAPPPPPPPPPP 150
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 898 GGXGGGXXXXXXGXGXGXXLXGXXGGGPXXGXRLSXGGG 782
GG GGG G G G GGG G R GGG
Sbjct: 36 GGYGGGDRGSFGGGDRGG-FRGGRGGGDRGGFRGGRGGG 73
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXP 896
P P P PPP P P P P PPP P
Sbjct: 44 PMPMPMPMPVCPPPPPCPAQFCP-PPPICPPPPPPPMP 80
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 766 AXXTPXPPPGKXAXXXXGPLXXPXPXXXXAXXPXXLXXPLPPP 894
A P PPP K + G P P + P P PPP
Sbjct: 234 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 766 AXXTPXPPPGKXAXXXXGPLXXPXPXXXXAXXPXXLXXPLPPP 894
A P PPP K + G P P + P P PPP
Sbjct: 255 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 766 AXXTPXPPPGKXAXXXXGPLXXPXPXXXXAXXPXXLXXPLPPP 894
A P PPP K + G P P + P P PPP
Sbjct: 240 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P P P P P P PPP PP
Sbjct: 77 PPPLPLSNPPAKPTPPPPPPK-PTIRPPPIPASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 783 PPPXEXRXPXXGPPPXXPXXXXPXPXPXXXXXXPPPXPP 899
PPP P P P P P P PPP PP
Sbjct: 299 PPPLPLSNPPAKPTPPPPPPK-PTIRPPPIPASPPPRPP 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,926,000
Number of Sequences: 27780
Number of extensions: 300089
Number of successful extensions: 1672
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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