Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_C12
         (964 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.77 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   1.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   1.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.2  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   9.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   9.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   9.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   9.5  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = +3

Query: 663 APGXSPLPHXXHPXPGSLLXIXPXPLXPPXPPPXXXPT 776
           APG  P PH     P       P    PP  PP   P+
Sbjct: 20  APGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPS 57


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 179 NLPSLCEPVVWVNNFSLYYYFKESKIPH*LTNNGQT 72
           N+ S+C P + V + +     K+ KIPH +  N  T
Sbjct: 143 NVRSVCPPQLLVFDLNTSQLLKQVKIPHDIAVNTTT 178


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 847  PPPPPXPP 870
            PPPPP PP
Sbjct: 1355 PPPPPPPP 1362



 Score = 21.4 bits (43), Expect(2) = 1.4
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 737  PXPPXPPPXGSXY 775
            P PP PP  G  Y
Sbjct: 1356 PPPPPPPSSGQAY 1368



 Score = 21.0 bits (42), Expect(2) = 1.4
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 725  RXXTPXPPXPPP 760
            R   P PP PPP
Sbjct: 1351 RQQQPPPPPPPP 1362


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -1

Query: 799 GGXGGEXXVG*XXGGGXGG 743
           G  GG   VG   GGG GG
Sbjct: 33  GASGGSIVVGANNGGGGGG 51


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 699 PXPGSLLXIXPXPLXPP 749
           P PG+L  I   PL PP
Sbjct: 81  PVPGNLEQIGSRPLHPP 97


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = -3

Query: 179 NLPSLCEPVVWVNNFSLYYYFKESKIPH*LTNNGQ 75
           N   +C P ++  + +     K+ +IPH +   G+
Sbjct: 150 NTQPMCSPKLFAFDLNTSQLLKQVEIPHDVATTGK 184


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 74  FVRCWLINVEFLIL*NNNTVKNY*PTQLVHTTMEGSLXRTHIVHCQRDVYFG 229
           F+   L  V  L+   +N+V      QL+ +T    L RTH  H +  V  G
Sbjct: 7   FLAVGLFGVLLLLTNADNSVHILSKYQLITSTTLNWLPRTHYDHLKEIVIGG 58


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = -3

Query: 179 NLPSLCEPVVWVNNFSLYYYFKESKIPH*LTNNGQT 72
           N+  +C P +   + +     K+ +IPH +  N  T
Sbjct: 149 NIQLMCSPKLLAFDLNTSKLLKQIEIPHNIAVNAST 184


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = -3

Query: 179 NLPSLCEPVVWVNNFSLYYYFKESKIPH*LTNNGQT 72
           N   +C P + V + +  +  K+  +PH +  N  T
Sbjct: 149 NTQPMCSPKLHVFDLNTSHQLKQVVMPHDIAVNAST 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,451
Number of Sequences: 438
Number of extensions: 7780
Number of successful extensions: 27
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31686018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)