Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_C08
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like pr...    32   0.61 
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr...    32   0.61 
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr...    32   0.61 
AB023496-1|BAA97564.1|  793|Caenorhabditis elegans kinesin like ...    32   0.61 
AF036704-1|AAB88560.2|  293|Caenorhabditis elegans Hypothetical ...    29   5.7  

>U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like
           protein protein 4,isoform c protein.
          Length = 1576

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 779 PGLCAPTPXXXPDRLPPYP 835
           PG C PTP   P  LPP+P
Sbjct: 685 PGFCLPTPITTPTGLPPFP 703


>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like
           protein protein 4,isoform b protein.
          Length = 1610

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 779 PGLCAPTPXXXPDRLPPYP 835
           PG C PTP   P  LPP+P
Sbjct: 685 PGFCLPTPITTPTGLPPFP 703


>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like
           protein protein 4,isoform a protein.
          Length = 1595

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 779 PGLCAPTPXXXPDRLPPYP 835
           PG C PTP   P  LPP+P
Sbjct: 685 PGFCLPTPITTPTGLPPFP 703


>AB023496-1|BAA97564.1|  793|Caenorhabditis elegans kinesin like
           protein KLP-4 protein.
          Length = 793

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 779 PGLCAPTPXXXPDRLPPYP 835
           PG C PTP   P  LPP+P
Sbjct: 105 PGFCLPTPITTPTGLPPFP 123


>AF036704-1|AAB88560.2|  293|Caenorhabditis elegans Hypothetical
           protein ZK185.3 protein.
          Length = 293

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 657 CFRPCRLPDTCPPFSLXGS 713
           CFR  RLPD+C P  + GS
Sbjct: 60  CFRHNRLPDSCRPILMIGS 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,866,823
Number of Sequences: 27780
Number of extensions: 367772
Number of successful extensions: 876
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)