Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_C02
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.7  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 637 GGGGXXPPPPXXGGGGG 587
           GGG    P P  GGGGG
Sbjct: 215 GGGSSGGPGPGGGGGGG 231



 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 637 GGGGXXPPPPXXGGGGG 587
           GGGG     P  GGGGG
Sbjct: 213 GGGGGSSGGPGPGGGGG 229



 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 637 GGGGXXPPPPXXGGGGG 587
           GGGG    P   GGGGG
Sbjct: 214 GGGGSSGGPGPGGGGGG 230



 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 649 PQKXGGGGXXPPPPXXGGGGG 587
           P   GG    P P   GGGGG
Sbjct: 212 PGGGGGSSGGPGPGGGGGGGG 232


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 588 PPPPPXXGGGGXXPPP 635
           PPPPP  GG     PP
Sbjct: 530 PPPPPPPGGAVLNIPP 545



 Score = 23.4 bits (48), Expect = 8.9
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 591 PPPPXXGGGGXXPPPPXF 644
           PPPP   GG     PP F
Sbjct: 530 PPPPPPPGGAVLNIPPQF 547


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,248
Number of Sequences: 2352
Number of extensions: 7236
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)