Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_C01
         (894 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    26   0.35 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.9  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -1

Query: 489 GNSLIRGIGCGTELQSEVVVSVNDLDIVSGHDECKVXWEVLSN 361
           GN+++ GI   ++L++ ++ S        G+D   + WE  +N
Sbjct: 108 GNAILNGIVASSKLRASLISSCLSFFSQWGYDGIDIDWEYPAN 150


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 302 RDGTPWSTATSCGSATDR 355
           R+GT  +TA SC S+T R
Sbjct: 378 RNGTFSTTANSCRSSTFR 395


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,152
Number of Sequences: 336
Number of extensions: 2566
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)