Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_C01
         (894 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128082-1|BAC87263.1|  236|Homo sapiens protein ( Homo sapiens ...    33   1.1  

>AK128082-1|BAC87263.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46203 fis, clone TESTI4008305. ).
          Length = 236

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 23/71 (32%), Positives = 38/71 (53%)
 Frame = +2

Query: 38  ISIRRLEGDLKGS*QNETSRLYLRCACSPPARASLNYPRTLLTKTSRRNCTTASSPATTT 217
           +S RR+ G +  S +  T+ LY  C  +P    S++ PR+L+++ SRR    + S +T  
Sbjct: 31  MSARRMVGWMYWSKEGLTNLLY--CLMTP----SMSRPRSLMSRRSRRTRRMSESVSTKI 84

Query: 218 VLSVRAWNMRA 250
            +S   W  RA
Sbjct: 85  FMSRSWWRQRA 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,893,911
Number of Sequences: 237096
Number of extensions: 1826848
Number of successful extensions: 5232
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5115
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)