Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_C01
         (894 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    31   2.1  
X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein pr...    29   6.5  
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P...    29   6.5  
AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-P...    29   6.5  
AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-P...    29   6.5  

>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 25/70 (35%), Positives = 30/70 (42%)
 Frame = +2

Query: 128 ARASLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAWNMRAKARAPSSRM*XTT*SLTRD 307
           +R +   PR+  T T+RR  TT     TTT  S      R     P S    TT S    
Sbjct: 393 SRPTTTTPRSTTTTTTRRPTTTTPRSTTTTSTS------RPTTTTPRSTT-TTTTSRPTT 445

Query: 308 GTPWSTATSC 337
            TP ST T+C
Sbjct: 446 TTPRSTTTTC 455



 Score = 29.1 bits (62), Expect = 8.6
 Identities = 28/82 (34%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
 Frame = +2

Query: 110 CACSPPARASLNYPR-TLLTKTSRRNCTTASSPATTTVLSVRAWNMRAKARAPSSRM*XT 286
           C CSP        PR T  T TSR   TT  S  TTT         R+     +S    T
Sbjct: 551 CTCSPTTTT----PRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTTSTSGPTTT 606

Query: 287 T-*SLTRDGTPWSTATSCGSAT 349
           T  S T   T   T T+  S T
Sbjct: 607 TPRSTTTTSTSGPTTTTPRSTT 628


>X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein
            protein.
          Length = 2175

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
 Frame = +2

Query: 14   INYREFLKISIRRLEGDLKGS*QNETSRLYLRCACSPPARASLNYPRTLLTKTSRRNCTT 193
            IN  +   + +RRL     GS  +E     L     PPA +S        T +S  + T+
Sbjct: 2099 INEEKLRMVRVRRLSSTGGGS--SEEMPAPLAPPPPPPAASSSIVSGESTTSSSSSSNTS 2156

Query: 194  ASSPATTTVLSVRA--WN 241
            +S+PA TT  +  A  WN
Sbjct: 2157 SSTPAVTTAAATAAAGWN 2174


>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
           protein.
          Length = 3539

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +2

Query: 113 ACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLS 226
           +CSP + ++     T  T+TS  N T  SS ATTTV S
Sbjct: 747 SCSPSSSSASTLLSTA-TRTSMSNSTCTSSAATTTVSS 783


>AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-PA,
            isoform A protein.
          Length = 2175

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
 Frame = +2

Query: 14   INYREFLKISIRRLEGDLKGS*QNETSRLYLRCACSPPARASLNYPRTLLTKTSRRNCTT 193
            IN  +   + +RRL     GS  +E     L     PPA +S        T +S  + T+
Sbjct: 2099 INEEKLRMVRVRRLSSTGGGS--SEEMPAPLAPPPPPPAASSSIVSGESTTSSSSSSNTS 2156

Query: 194  ASSPATTTVLSVRA--WN 241
            +S+PA TT  +  A  WN
Sbjct: 2157 SSTPAVTTAAATAAAGWN 2174


>AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-PA
           protein.
          Length = 881

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 19/78 (24%), Positives = 28/78 (35%)
 Frame = +2

Query: 116 CSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAWNMRAKARAPSSRM*XTT*S 295
           C+P    +     T  T T+    TT  +P TTT  +             +     TT S
Sbjct: 355 CTPTTTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTTCTPTTTTTTTS 414

Query: 296 LTRDGTPWSTATSCGSAT 349
            T   T  +T T+  + T
Sbjct: 415 TTTTTTTTTTTTTTTTTT 432



 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/78 (23%), Positives = 29/78 (37%)
 Frame = +2

Query: 116 CSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAWNMRAKARAPSSRM*XTT*S 295
           C+P    +     T  T T+    TT  +P TTT  +             ++    TT +
Sbjct: 629 CTPTTTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTCTPTTTTTTTTTTT 688

Query: 296 LTRDGTPWSTATSCGSAT 349
            T   T  +T T+  + T
Sbjct: 689 TTTTTTTCTTTTTTTTTT 706



 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/78 (23%), Positives = 29/78 (37%)
 Frame = +2

Query: 116 CSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAWNMRAKARAPSSRM*XTT*S 295
           C+P    +     T  T T+    TT  +P TTT  +             ++    TT +
Sbjct: 237 CTPTTTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTTTTTCTPTTTTT 296

Query: 296 LTRDGTPWSTATSCGSAT 349
            T   T  +T T+  + T
Sbjct: 297 TTTTTTTTTTTTTTTTTT 314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,369,336
Number of Sequences: 53049
Number of extensions: 568370
Number of successful extensions: 2026
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1981
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)