Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_B21
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    31   1.2  
01_01_0161 - 1385408-1385566,1385815-1385943,1386164-1386322,138...    29   5.0  
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18...    24   5.6  
01_01_0796 + 6190931-6192745                                           29   6.6  
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468...    28   8.8  

>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 528 PXXXXPPPXPXPPRPXAPDXPL 593
           P    PPP P PPRP  P  P+
Sbjct: 359 PPPPPPPPPPPPPRPPPPPPPI 380


>01_01_0161 -
           1385408-1385566,1385815-1385943,1386164-1386322,
           1387228-1387571,1387641-1387905,1387998-1388075,
           1388207-1388260,1389341-1389361,1389453-1389578,
           1389696-1389863,1389923-1390313,1390629-1390710,
           1391175-1391536,1391806-1392630,1392956-1393476
          Length = 1227

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 543 PPPXPXPPRPXAP 581
           PPP P PPRP AP
Sbjct: 933 PPPGPVPPRPRAP 945


>05_01_0028 +
           182528-183852,183967-184127,184872-185116,185330-186073
          Length = 824

 Score = 23.8 bits (49), Expect(2) = 5.6
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +3

Query: 546 PPXPXPPRPXAPDXP 590
           PP P PP P  P  P
Sbjct: 112 PPLPPPPAPAPPPTP 126



 Score = 23.4 bits (48), Expect(2) = 5.6
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 528 PXXXXPPPXPXPPR 569
           P    PPP P PPR
Sbjct: 70  PTPPPPPPAPRPPR 83


>01_01_0796 + 6190931-6192745
          Length = 604

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 543 PPPXPXPPRPXAPDXPLXXXXW 608
           PPP P PP P  P+  L    W
Sbjct: 193 PPPPPPPPPPPQPEQQLQLPQW 214


>08_01_0539 +
           4679392-4681282,4682060-4682104,4682403-4683560,
           4683834-4684204,4684290-4684835,4684927-4685027,
           4685117-4685933,4686025-4686213,4686313-4686384,
           4686477-4686587,4686647-4686652,4686694-4686794,
           4687714-4687813,4687891-4687986,4688157-4688273,
           4688367-4688492,4688566-4688619,4688745-4688992,
           4689087-4689195,4689284-4689583,4689799-4689963
          Length = 2240

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 528 PXXXXPPPXPXPPRPXAPDXP 590
           P    PPP P PP P  P+ P
Sbjct: 429 PLPPPPPPPPPPPPPLPPNMP 449


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,765,413
Number of Sequences: 37544
Number of extensions: 244255
Number of successful extensions: 2923
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2550
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)