Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_B20
(1234 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 38 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.007
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.007
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.035
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.062
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.33
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 30 0.57
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.76
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 4.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 9.3
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 38.3 bits (85), Expect = 0.002
Identities = 36/144 (25%), Positives = 36/144 (25%), Gaps = 2/144 (1%)
Frame = +1
Query: 661 PPXTRXXXPXRXRPPXPXRXXXXXRXXXTPPXHPRXXRGTXXXXPPXXARXSXXRXPXAP 840
PP P PP P PP H G PP P P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPP-PPMHHEP--GEHMPPPPMHHEPGEHMPP--P 262
Query: 841 RTXXPPXTSXPPXTXHXXPAXXRRTPGXPRCXXAXXPXARXPTXPRGHXXXP--PXPPXR 1014
P PP H P P P P P P H P PP
Sbjct: 263 PMHHEPGEHMPPPPMHHEPG--EHMPPPPM---HHEPGEHMPPPPMHHEPGEHMPPPPMH 317
Query: 1015 HPXRTXXXPPPSPHHPXXXXNSPP 1086
H PPP H P PP
Sbjct: 318 HEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 36.7 bits (81), Expect = 0.007
Identities = 35/143 (24%), Positives = 35/143 (24%), Gaps = 2/143 (1%)
Frame = +1
Query: 661 PPXTRXXXPXRXRPPXPXRXXXXXRXXXTPPXHPRXXRGTXXXXPPXXARXSXXRXPXAP 840
PP P PP P PP H G PP P P
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPP-PPMHHEP--GEHMPPPPMHHEPGEHMPP--P 275
Query: 841 RTXXPPXTSXPPXTXHXXPAXXRRTPGXPRCXXAXXPXARXPTXPRGHXXXP--PXPPXR 1014
P PP H P P P P P P H P PP
Sbjct: 276 PMHHEPGEHMPPPPMHHEPG--EHMPPPPM---HHEPGEHMPPPPMHHEPGEHMPPPPMH 330
Query: 1015 HPXRTXXXPPPSPHHPXXXXNSP 1083
H PPP HH P
Sbjct: 331 HEPGEHMPPPPFKHHELEEHEGP 353
Score = 35.1 bits (77), Expect = 0.020
Identities = 33/133 (24%), Positives = 34/133 (25%), Gaps = 1/133 (0%)
Frame = +1
Query: 748 PPXHPRXXRGTXXXXPPXXARXSXXRXPXAPRTXXPPXTSXPPXTXHXXPAXXRRTPGXP 927
PP H + G PP P P P PP H P P P
Sbjct: 210 PPMHHKP--GEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPG--EHMPPPP 263
Query: 928 RCXXAXXPXARXPTXPRGHXXXPPXPPX-RHPXRTXXXPPPSPHHPXXXXNSPPPXXXXP 1104
P P P H PP H PPP HH PPP P
Sbjct: 264 M---HHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Query: 1105 XPAXXXXPXXXPP 1143
P P
Sbjct: 321 GEHMPPPPMHHEP 333
Score = 33.9 bits (74), Expect = 0.047
Identities = 26/105 (24%), Positives = 26/105 (24%), Gaps = 3/105 (2%)
Frame = +1
Query: 838 PRTXXPPXTSXPPXTXHXXPAXXRRTPGX--PRCXXAXXPXARXPTXPRGHXXXPPXPPX 1011
P PP H P PG P P P P H PP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Query: 1012 -RHPXRTXXXPPPSPHHPXXXXNSPPPXXXXPXPAXXXXPXXXPP 1143
H PPP HH PPP P P P
Sbjct: 263 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.007
Identities = 58/250 (23%), Positives = 65/250 (26%), Gaps = 5/250 (2%)
Frame = +1
Query: 418 PXXXPAPXAXXEHNAAPXXRPPXCXSHPPXRXXAPILS-----PXHXPXRRTXXRVPPXX 582
P P P A N A P R A L+ P P R P
Sbjct: 268 PNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPI 327
Query: 583 XPXXXXXAXXXXPAXAXARAXGXXPXPPXTRXXXPXRXRPPXPXRXXXXXRXXXTPPXHP 762
+ P + A G P PP R P PP P R PP
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPP----PPPPRSAPSTGRQP--PPLSS 381
Query: 763 RXXRGTXXXXPPXXARXSXXRXPXAPRTXXPPXTSXPPXTXHXXPAXXRRTPGXPRCXXA 942
PP S P P TS PP P P
Sbjct: 382 SRAVSNPPAPPPAIPGRSA---PALPPLGNASRTSTPPVPT---------PPSLPPSAPP 429
Query: 943 XXPXARXPTXPRGHXXXPPXPPXRHPXRTXXXPPPSPHHPXXXXNSPPPXXXXPXPAXXX 1122
P + P+ P G PP PP P +P P +PP P P
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPPSA---------PIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Query: 1123 XPXXXPPXAS 1152
P P AS
Sbjct: 481 APAPAAPVAS 490
Score = 33.9 bits (74), Expect = 0.047
Identities = 26/100 (26%), Positives = 28/100 (28%), Gaps = 2/100 (2%)
Frame = +3
Query: 849 PPAPHLXXPXXXXXXXXXRXXDARXTAXQXGXXPXXPXPNXPPXPXXXPPXPPXAXPXXH 1028
PPAP P +R + P P P P PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 1029 XXXP--PPKPXPPXXXXX*PXAPXXATXPGXXPXPXXXAP 1142
P P P P P P A P P P AP
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 33.5 bits (73), Expect = 0.062
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = +3
Query: 957 PXPNXPPXPXXXPP-XPPXAXPXXHXXXPPPKPXPPXXXXX*PXA-PXXATXPGXXPXPX 1130
P P P P PP PP A P P P PP P A P A P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSA----PIAPPLPAGMPAAPPLPP 471
Query: 1131 XXAPXRXXXXPAP 1169
PAP
Sbjct: 472 AAPAPPPAPAPAP 484
Score = 32.7 bits (71), Expect = 0.11
Identities = 32/145 (22%), Positives = 36/145 (24%), Gaps = 1/145 (0%)
Frame = +2
Query: 290 PAXXXPXXQXTDGXPXXXRENGXXPXXAPXAXPEXXXXHPP-SXLEXXRXPXPXANTTPX 466
P P P + P P + P PP S P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 467 XTAAXRXAXXTXRTXXXHPSSHPTTXXPDXPXREXPPXXXPPXXXXPPXXXPHXHXPAPX 646
+A P P + P P PP P P P AP
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPPSAPP-SLPPSAPPSLPMGAPAAPP-LPPSAPI 455
Query: 647 AXARXHXXPAXXXXPAXAPPPPXXP 721
A PA P AP PP P
Sbjct: 456 APPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.5 bits (58), Expect = 4.0
Identities = 22/88 (25%), Positives = 23/88 (26%), Gaps = 9/88 (10%)
Frame = +1
Query: 994 PPXPPXRH---------PXRTXXXPPPSPHHPXXXXNSPPPXXXXPXPAXXXXPXXXPPX 1146
PP PP R P PPP P PPP + P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 1147 ASXXXXXXASGAXXXXTXXGTTPPXXXP 1230
S A T TPP P
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPP 425
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.007
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +3
Query: 957 PXPNXPPXPXXXPPXPPXAXPXXHXXXPPPKPXPP 1061
P P PP P P PP P PPP P PP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 5.3
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 994 PPXPPXRHPXRTXXXPPPSPHHPXXXXNSPPPXXXXPXPAXXXXPXXXPP 1143
PP PP P P P P PPP P A P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPP-PAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.1 bits (57), Expect = 5.3
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +3
Query: 948 PXXPXPNXPPXPXXXP-PXPPXAXPXXHXXXPPPKPXPPXXXXX*PXAP 1091
P P P P P P PP P PPP P PP P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPP---PAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 34.3 bits (75), Expect = 0.035
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = +1
Query: 940 AXXPXARXPTXPRGHXXXPPXPPXRHPXRTXXXPPPSPHH-PXXXXNSPPPXXXXPXPAX 1116
A P A P P+ P P R PPPSP P +PP P PA
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPR-----PSIPPPSPASAPPIPSKAPPIPSSLPPPAQ 176
Query: 1117 XXXPXXXPPXA 1149
P PP A
Sbjct: 177 PAAPVKSPPSA 187
Score = 33.5 bits (73), Expect = 0.062
Identities = 24/104 (23%), Positives = 31/104 (29%)
Frame = +1
Query: 793 PPXXARXSXXRXPXAPRTXXPPXTSXPPXTXHXXPAXXRRTPGXPRCXXAXXPXARXPTX 972
PP + P T PP S PP + P + P P + P A+
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP---SSLPPPAQPAAP 180
Query: 973 PRGHXXXPPXPPXRHPXRTXXXPPPSPHHPXXXXNSPPPXXXXP 1104
+ P P P PPP P +S P P
Sbjct: 181 VKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 31.5 bits (68), Expect = 0.25
Identities = 32/136 (23%), Positives = 36/136 (26%), Gaps = 1/136 (0%)
Frame = +3
Query: 822 APPXXPTXXPPAPHLXXPXXXXXXXXXRXXDARXTAXQXGXXPXXPXPNXPPXPXXXPPX 1001
APP P P L P P P PP P
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 1002 PPXAXPXXHXXXPP-PKPXPPXXXXX*PXAPXXATXPGXXPXPXXXAPXRXXXXPAPXLX 1178
P + P PP P PP P A ++ P P AP P
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPPLSQAPVA-NTSSRPSSFAPPAGHAPNVTSESPKFPNR 241
Query: 1179 GXXXXXTAXXNPTPPS 1226
G +A P PPS
Sbjct: 242 G-PSIPSASVPPVPPS 256
Score = 30.7 bits (66), Expect = 0.43
Identities = 28/117 (23%), Positives = 34/117 (29%), Gaps = 5/117 (4%)
Frame = +1
Query: 748 PPXHPRXXRGTXXXXPPXXARXSXXRXPXAPRTXXPPXTSXPPXTXHXXPAXXRRTPGXP 927
PP P PP A P +P + P + PP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 928 RCXXAXXPXARXPTXPRGHXXXPPXPPXRHP-----XRTXXXPPPSPHHPXXXXNSP 1083
P A P P+ PP P + P R PP+ H P SP
Sbjct: 184 PPSAPSLPSAVPPMPPK----VPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESP 236
Score = 26.2 bits (55), Expect = 9.3
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = +2
Query: 533 PTTXXPDXPXREXP-PXXXPPXXXXPPXXXPHXHXPAPXAXARXHXXPAXXXXPAXAPP- 706
P T P P P P PP P PA A A P+ P+ PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPA-APVKSPPSAPSLPSAVPPM 197
Query: 707 PPXXP 721
PP P
Sbjct: 198 PPKVP 202
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.062
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +3
Query: 933 QXGXXPXXPXPNXPPXPXXXPPXPPXAXPXXHXXXPPPKPXPPXXXXX*PXAP 1091
Q P P PP P PP PP A P PP P PP P P
Sbjct: 1695 QSAAPPQMSAPTPPPPPMSVPP-PPSAPPM--PAGPPSAPPPPLPASSAPSVP 1744
Score = 31.1 bits (67), Expect = 0.33
Identities = 20/62 (32%), Positives = 22/62 (35%)
Frame = +2
Query: 527 SHPTTXXPDXPXREXPPXXXPPXXXXPPXXXPHXHXPAPXAXARXHXXPAXXXXPAXAPP 706
+HP + P P PP P PP P P P A P P APP
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVP----PPPSA-------PPMPAGPPSAPP 1732
Query: 707 PP 712
PP
Sbjct: 1733 PP 1734
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +3
Query: 972 PPXPXXXPPXPPXAXPXXHXXXPPPKPXPPXXXXX*PXAPXXATXPGXXPXPXXXA 1139
P P PP P + P P P PP P AP P P P A
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTP-PPPPMSVPPPPSAPPMPAGPPSAPPPPLPA 1737
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.33
Identities = 26/86 (30%), Positives = 26/86 (30%)
Frame = -3
Query: 1109 GXGXXXXGGGLXXXXXGWXGLGGGXXXVRXGXRXGGXGGXXXWPRGXVGXRAXGXXAXLX 930
G G GGG G G GG G GG GG P G G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEG--GPGGFGGGP 244
Query: 929 RGXPGVLRSXAGXXXXVXGGXEVXGG 852
G G L G GG GG
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -3
Query: 1169 GGGXXGXAXGGXXXGXWXXAGXGXXXXGGGLXXXXXGWXGLGGG 1038
G G G GG G G G GGGL G G GGG
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGG-GPGGFGGGLGGFGGGPGGFGGG 264
Score = 27.9 bits (59), Expect = 3.1
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -3
Query: 1166 GGXXGXAXGGXXXGXWXXAGXGXXXXGGGLXXXXXGWXGLGGGXXXVRXGXRXGGXGGXX 987
GG G GG G G GG G G GGG G GG GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG-----PGGFEGGPGGFG 241
Query: 986 XWPRGXVG 963
P G G
Sbjct: 242 GGPGGFGG 249
Score = 26.2 bits (55), Expect = 9.3
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -3
Query: 1169 GGGXXGXAXGGXXXGXWXXAGXGXXXXGGGLXXXXXGWXGLGGGXXXVRXGXRXGGXGG 993
G G GG G G G GGG G G GGG G GG GG
Sbjct: 215 GEGHHHGGHGGFGGGPGGFEG-GPGGFGGGPGGFGGGLGGFGGGPGG--FGGGPGGHGG 270
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 30.3 bits (65), Expect = 0.57
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 994 PPXPPXRHPXRTXXXPPPSPHHPXXXXNSPPPXXXXPXP 1110
PP PP +H PP P HP N+ PP P
Sbjct: 161 PPFPPTQH-HHPHTRPPHHPPHPHFHNNNYPPPYCFQSP 198
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.76
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 521 PSSHPTTXXPDXPXREXPPXXXPPXXXXPPXXXPHXHXPAPXAXARXHXXPAXXXXPAXA 700
P P+ P P P P PP P P P PA P+ A
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA----PSGA 1158
Query: 701 PPPP 712
PP P
Sbjct: 1159 PPVP 1162
Score = 29.5 bits (63), Expect = 1.0
Identities = 25/119 (21%), Positives = 26/119 (21%), Gaps = 1/119 (0%)
Frame = +2
Query: 521 PSSHPTTXXPDXPXREXPPXXXPPXXXXPPXXXPHXHXPAPXAXARXHXXPAXXXXPAXA 700
P P+ P P P P PP P P P PA
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPV 1181
Query: 701 PPPPXXPXAXXXPXRXXXXXXXXXXXXXXPXP-XPXXVPAXGAXXXPHXXPXRPXPXXP 874
P P P P P VP A P P P P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 28.3 bits (60), Expect = 2.3
Identities = 35/164 (21%), Positives = 42/164 (25%), Gaps = 8/164 (4%)
Frame = +2
Query: 407 PPSXLEXXRXPXPXANTTPXXTAAXRXAXXTXRTXXXHPSSHPT----TXXPDXPXREXP 574
PP + P P +TP + A S P+ + P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 575 PXXXPPXXXXPPXXXPHXHXPAPXAXARXHXXPAXXXXPAXAPPPPXXPXAXXXPXRXXX 754
P P PP P P A + P APP P A P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPS---GAPPVPKPSVAAPPVPVPSGAPPVPKPSVA 1148
Query: 755 XXXXXXXXXXXPXPXP----XXVPAXGAXXXPHXXPXRPXPXXP 874
P P P VPA + P P P P
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Score = 27.9 bits (59), Expect = 3.1
Identities = 30/134 (22%), Positives = 35/134 (26%)
Frame = +1
Query: 829 PXAPRTXXPPXTSXPPXTXHXXPAXXRRTPGXPRCXXAXXPXARXPTXPRGHXXXPPXPP 1008
P AP PP P + P P + P PT PP P
Sbjct: 1004 PAAPLARVPPV---PKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTST------PPVP- 1053
Query: 1009 XRHPXRTXXXPPPSPHHPXXXXNSPPPXXXXPXPAXXXXPXXXPPXASXXXXXXASGAXX 1188
+ PPP P + P P P PA P P + S A
Sbjct: 1054 -KSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVP 1112
Query: 1189 XXTXXGTTPPXXXP 1230
PP P
Sbjct: 1113 PVPAPSGAPPVPKP 1126
Score = 26.6 bits (56), Expect = 7.1
Identities = 24/104 (23%), Positives = 26/104 (25%), Gaps = 2/104 (1%)
Frame = +3
Query: 822 APPXX-PTXXPPAPHLXXPXXXXXXXXXRXXDARXTAXQXGXXPXXPXPNX-PPXPXXXP 995
APP PT PP P + P P P+ PP P
Sbjct: 1040 APPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSV 1099
Query: 996 PXPPXAXPXXHXXXPPPKPXPPXXXXX*PXAPXXATXPGXXPXP 1127
PP P P P AP G P P
Sbjct: 1100 AAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 26.6 bits (56), Expect = 7.1
Identities = 29/121 (23%), Positives = 31/121 (25%), Gaps = 1/121 (0%)
Frame = +3
Query: 783 PXXXPXLXXXQRXAPPXX-PTXXPPAPHLXXPXXXXXXXXXRXXDARXTAXQXGXXPXXP 959
P P + APP P+ PP P A G P P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAA--GVPPVPP 1193
Query: 960 XPNXPPXPXXXPPXPPXAXPXXHXXXPPPKPXPPXXXXX*PXAPXXATXPGXXPXPXXXA 1139
PP P PP P PP P P P P P P A
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPP----STAPPVPTPSAGL---PPVPVPTAKAPPVPAPSSEA 1246
Query: 1140 P 1142
P
Sbjct: 1247 P 1247
Score = 26.6 bits (56), Expect = 7.1
Identities = 23/95 (24%), Positives = 26/95 (27%), Gaps = 2/95 (2%)
Frame = +3
Query: 948 PXXPXPNX--PPXPXXXPPXPPXAXPXXHXXXPPPKPXPPXXXXX*PXAPXXATXPGXXP 1121
P P P+ PP P PP P P P P P G P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 1122 XPXXXAPXRXXXXPAPXLXGXXXXXTAXXNPTPPS 1226
P A + PAP P+P S
Sbjct: 1229 VPVPTA--KAPPVPAPSSEAPSVSTPRSSVPSPHS 1261
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 973 PRGHXXXPPXPPXRHPXRTXXXPPPSPHHPXXXXNSPP 1086
P G+ PP PP P + PPP P + N P
Sbjct: 5 PPGNPPPPPPPPGFEPP-SQPPPPPPPGYVKKRKNKTP 41
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 9.3
Identities = 37/163 (22%), Positives = 42/163 (25%)
Frame = +2
Query: 524 SSHPTTXXPDXPXREXPPXXXPPXXXXPPXXXPHXHXPAPXAXARXHXXPAXXXXPAXAP 703
SS P + P P P PP P P+ A A P+ P P
Sbjct: 140 SSAPASQEPSASGVNAPTVSAPNSMVSPP---PSFQPPSAAAPATS--LPSDYNPPPPPP 194
Query: 704 PPPXXPXAXXXPXRXXXXXXXXXXXXXXPXPXPXXVPAXGAXXXPHXXPXRPXPXXPXXX 883
PPP P P P A P P P P P
Sbjct: 195 PPPAVEDQAADANE--PDDYYSSGRAVSPEIPPTYTPKQ-ADPLP-APPPPPPPTLPPQS 250
Query: 884 XTXXXXXXXGRQXNRXAXRXXXPXPAAQXPPXATXXTPXXPPS 1012
R N + P PP AT P PP+
Sbjct: 251 TNTSQLPMPSRNVNNLGSQVNIP------PPPATPSQPPRPPT 287
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.138 0.491
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,020,416
Number of Sequences: 5004
Number of extensions: 23503
Number of successful extensions: 290
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 669373152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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