Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_B20
         (1234 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    25   1.4  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    25   1.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   1.8  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    24   2.4  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   4.1  

>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 24/94 (25%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
 Frame = +3

Query: 957  PXPNXPPXPXXXPPXPPXAXPXXHXXXPPPKPXPP---XXXXX*PXAPXXATXPGXXPXP 1127
            P P  PP P       P A P  +     P+P PP         P A      P   P P
Sbjct: 51   PQPR-PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQP 109

Query: 1128 XXXAPXRXXXXPAPXLXGXXXXXTAXXNPTPPSP 1229
                P R      P              P PP P
Sbjct: 110  RPPHP-RLRREAEPEAEPGNNRPVYIPQPRPPHP 142


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
            protein.
          Length = 199

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 24/94 (25%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
 Frame = +3

Query: 957  PXPNXPPXPXXXPPXPPXAXPXXHXXXPPPKPXPP---XXXXX*PXAPXXATXPGXXPXP 1127
            P P  PP P       P A P  +     P+P PP         P A      P   P P
Sbjct: 22   PQPR-PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQP 80

Query: 1128 XXXAPXRXXXXPAPXLXGXXXXXTAXXNPTPPSP 1229
                P R      P              P PP P
Sbjct: 81   RPPHP-RLRREAEPEAEPGNNRPVYIPQPRPPHP 113



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 24/94 (25%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
 Frame = +3

Query: 957  PXPNXPPXPXXXPPXPPXAXPXXHXXXPPPKPXPP---XXXXX*PXAPXXATXPGXXPXP 1127
            P P  PP P       P A P  +     P+P PP         P A      P   P P
Sbjct: 106  PQPR-PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAEPGNNRPVYIPQP 164

Query: 1128 XXXAPXRXXXXPAPXLXGXXXXXTAXXNPTPPSP 1229
                P R      P              P PP P
Sbjct: 165  RPPHP-RLRREAEPEAEPGNNRPVYIPQPRPPHP 197


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 12/42 (28%), Positives = 12/42 (28%)
 Frame = +3

Query: 933  QXGXXPXXPXPNXPPXPXXXPPXPPXAXPXXHXXXPPPKPXP 1058
            Q    P    P   P P   P  P    P      PPP   P
Sbjct: 11   QQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 22/89 (24%), Positives = 24/89 (26%), Gaps = 3/89 (3%)
 Frame = +3

Query: 972  PPXPXXXPPXPPXAXPXXHXXXPPPKPXPP---XXXXX*PXAPXXATXPGXXPXPXXXAP 1142
            PP P       P A P  +     P+P PP         P A      P   P P    P
Sbjct: 166  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 225

Query: 1143 XRXXXXPAPXLXGXXXXXTAXXNPTPPSP 1229
             R      P              P PP P
Sbjct: 226  -RLRREAEPEAEPGNNRPVYIPQPRPPHP 253



 Score = 23.4 bits (48), Expect = 4.1
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +3

Query: 957  PXPNXPPXPXXXPPXPPXAXPXXHXXXPPPKPXPP 1061
            P P  PP P       P A P  +     P+P PP
Sbjct: 50   PQPR-PPHPRLRREAEPEAEPGNNRPVYIPQPRPP 83



 Score = 23.4 bits (48), Expect = 4.1
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +3

Query: 957  PXPNXPPXPXXXPPXPPXAXPXXHXXXPPPKPXPP 1061
            P P  PP P       P A P  +     P+P PP
Sbjct: 246  PQPR-PPHPRLRREAKPEAKPGNNRPVYIPQPRPP 279



 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +3

Query: 972  PPXPXXXPPXPPXAXPXXHXXXPPPKPXPP 1061
            PP P       P A P  +     P+P PP
Sbjct: 110  PPHPRLRREAEPEAEPGNNRPVYIPQPRPP 139


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +3

Query: 957  PXPNXPPXPXXXPPXPPXAXPXXHXXXPPPKPXPP 1061
            P P  PP P       P A P  +     P+P PP
Sbjct: 51   PQPR-PPHPRLRREAEPKAEPGNNRPIYIPQPRPP 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.138    0.491 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,802
Number of Sequences: 438
Number of extensions: 5530
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42022050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)