Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_B17
         (912 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...   229   3e-60
Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical pr...    47   2e-05
AL132949-21|CAB61098.1|  866|Caenorhabditis elegans Hypothetical...    29   4.6  
U41011-4|AAA82287.1|  294|Caenorhabditis elegans Hypothetical pr...    29   6.1  

>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score =  229 bits (559), Expect = 3e-60
 Identities = 104/143 (72%), Positives = 117/143 (81%)
 Frame = +2

Query: 68  MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLXKVGVEAK 247
           MGKP+G+ TARK   HR+EQRW DK +KKAH+GT+WK+NPFGGASHAKGIVL K+GVEAK
Sbjct: 1   MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAK 60

Query: 248 QPNSAIRKCVRVXLIKNGKKVTAFVPRDGCLNHIEXNDEVLVAGFGRKGHAVGDXPGVRF 427
           QPNSAIRKCVRV LIKNGKK+TAFVP DGCLN +E NDEVLV+GFGR GHAVGD PGVRF
Sbjct: 61  QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRF 120

Query: 428 KXXXXXXXSLLPLYXEXXERPXS 496
           K       SL+ L+    ERP S
Sbjct: 121 KIVKVANTSLIALFKGKKERPRS 143


>Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical
           protein T03D8.2 protein.
          Length = 157

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 29/66 (43%), Positives = 40/66 (60%)
 Frame = +2

Query: 194 GASHAKGIVLXKVGVEAKQPNSAIRKCVRVXLIKNGKKVTAFVPRDGCLNHIEXNDEVLV 373
           G SH KGIVL  V    K+PNS  RKC  V L   G +V A++P  G  ++++ + +VLV
Sbjct: 72  GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128

Query: 374 AGFGRK 391
            G GR+
Sbjct: 129 KG-GRR 133


>AL132949-21|CAB61098.1|  866|Caenorhabditis elegans Hypothetical
           protein Y53F4B.24 protein.
          Length = 866

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 159 WAFLNSLSAHRCSRRWF--TCLRAVRIPRGLPIWIARQPNPNLKEFPI 22
           W  L+SL    CSR +   + L ++ + R L  W+  + N NLK F I
Sbjct: 565 WFTLDSLLKADCSRIFLDGSELTSIELNRFLRSWLLSESNRNLKSFEI 612


>U41011-4|AAA82287.1|  294|Caenorhabditis elegans Hypothetical
           protein D2024.4 protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 139 VRPSLFTTVVHVLTRRSYSSG 77
           VRP + TTV+HV+ R    SG
Sbjct: 189 VRPGIMTTVIHVMDRNPMKSG 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,167,546
Number of Sequences: 27780
Number of extensions: 277894
Number of successful extensions: 679
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)