Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_B16
         (900 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein pro...   187   4e-47
BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19 p...   187   4e-47
BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19 p...   187   4e-47
BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19 p...   187   4e-47
AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19 p...   187   4e-47
BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19 p...   186   1e-46
AB209470-1|BAD92707.1|  249|Homo sapiens proteasome beta 2 subun...    31   5.7  
AB007155-1|BAA28593.1|   18|Homo sapiens ribosomal protein S19 p...    31   5.7  

>M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein
           protein.
          Length = 145

 Score =  187 bits (456), Expect = 4e-47
 Identities = 88/138 (63%), Positives = 108/138 (78%)
 Frame = +1

Query: 88  MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 267
           M  VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 268 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 447
            RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120

Query: 448 RILTTQGRRDLDRIAAQV 501
           R LT QG+RDLDRIA QV
Sbjct: 121 RKLTPQGQRDLDRIAGQV 138


>BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  187 bits (456), Expect = 4e-47
 Identities = 88/138 (63%), Positives = 108/138 (78%)
 Frame = +1

Query: 88  MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 267
           M  VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 268 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 447
            RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120

Query: 448 RILTTQGRRDLDRIAAQV 501
           R LT QG+RDLDRIA QV
Sbjct: 121 RKLTPQGQRDLDRIAGQV 138


>BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  187 bits (456), Expect = 4e-47
 Identities = 88/138 (63%), Positives = 108/138 (78%)
 Frame = +1

Query: 88  MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 267
           M  VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 268 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 447
            RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120

Query: 448 RILTTQGRRDLDRIAAQV 501
           R LT QG+RDLDRIA QV
Sbjct: 121 RKLTPQGQRDLDRIAGQV 138


>BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  187 bits (456), Expect = 4e-47
 Identities = 88/138 (63%), Positives = 108/138 (78%)
 Frame = +1

Query: 88  MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 267
           M  VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 268 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 447
            RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120

Query: 448 RILTTQGRRDLDRIAAQV 501
           R LT QG+RDLDRIA QV
Sbjct: 121 RKLTPQGQRDLDRIAGQV 138


>AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  187 bits (456), Expect = 4e-47
 Identities = 88/138 (63%), Positives = 108/138 (78%)
 Frame = +1

Query: 88  MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 267
           M  VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 268 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 447
            RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120

Query: 448 RILTTQGRRDLDRIAAQV 501
           R LT QG+RDLDRIA QV
Sbjct: 121 RKLTPQGQRDLDRIAGQV 138


>BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19
           protein.
          Length = 157

 Score =  186 bits (453), Expect = 1e-46
 Identities = 87/135 (64%), Positives = 107/135 (79%)
 Frame = +1

Query: 97  VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 276
           VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+  RH
Sbjct: 16  VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 75

Query: 277 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 456
           +Y+R   GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 76  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 135

Query: 457 TTQGRRDLDRIAAQV 501
           T QG+RDLDRIA QV
Sbjct: 136 TPQGQRDLDRIAGQV 150


>AB209470-1|BAD92707.1|  249|Homo sapiens proteasome beta 2 subunit
           variant protein.
          Length = 249

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = +1

Query: 229 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 399
           Y P     R   +LR      P G  + T + GGR+  G   S  CR  G   R+AL
Sbjct: 179 YTPTISRERAVELLRKCLEEGPGGAGSSTALGGGRRSVGQDRSSSCRRKGRGRRRAL 235


>AB007155-1|BAA28593.1|   18|Homo sapiens ribosomal protein S19
           protein.
          Length = 18

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +1

Query: 445 GRILTTQGRRDLDRIAAQ 498
           GR LT QG+RDLDRIA Q
Sbjct: 1   GRKLTPQGQRDLDRIAGQ 18


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,984,855
Number of Sequences: 237096
Number of extensions: 2096020
Number of successful extensions: 7616
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6722
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)