Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_B14
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89...    91   1e-18
05_05_0093 + 22336593-22337198,22338123-22339076                       32   0.54 
02_02_0220 - 7992124-7992351,7992458-7992562,7993499-7993711,799...    29   3.8  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   6.7  
05_03_0446 + 14111667-14111906,14112011-14112418                       29   6.7  
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765...    28   8.8  
01_06_1114 + 34619597-34619972,34620772-34620852,34621294-346213...    28   8.8  

>08_01_0113 +
           897970-898038,898148-898271,898811-898896,898996-899049
          Length = 110

 Score = 91.1 bits (216), Expect = 1e-18
 Identities = 43/76 (56%), Positives = 57/76 (75%)
 Frame = +2

Query: 131 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 310
           +S +E+AC  +ALIL DD + +T EKI+T++KAA + VE YWPGLFAK LE  +V DLI 
Sbjct: 1   MSSSEVACTLAALILHDDGIPITSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLIL 60

Query: 311 NIGSGVGAAPAAGWSA 358
           ++GSG GAAP A  +A
Sbjct: 61  SVGSGGGAAPVAAAAA 76


>05_05_0093 + 22336593-22337198,22338123-22339076
          Length = 519

 Score = 32.3 bits (70), Expect = 0.54
 Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
 Frame = -3

Query: 348 PAAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRM 169
           PAA + P    + V   RTLM    LA   G+  +  T +  ++ E+ SP+  T   TR 
Sbjct: 296 PAAASGPASGVLFVCTHRTLMDPVVLATVLGRRVAAVTYSISRLSEVLSPI-PTVRLTRD 354

Query: 168 R----AE*THANSAFDTIFSFERASCRRP*LKREQA 73
           R    A+     S  D     E  +CR P L R  A
Sbjct: 355 RGVDAAQMRAELSRGDVAVCPEGTTCREPFLLRFSA 390


>02_02_0220 -
           7992124-7992351,7992458-7992562,7993499-7993711,
           7993937-7994196,7994425-7994701,7995226-7995371,
           7995519-7995903,7996680-7996964
          Length = 632

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +2

Query: 95  GLRQLARSKLKMVSKAELACVYSALILVDDDVAVTGEKIST 217
           G+R+LA+     V+K +     S  +L+ +DVA+TG+ ++T
Sbjct: 249 GIRKLAQIFQSSVAKKKAVGKKSKALLLGEDVAITGDCVTT 289


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = +1

Query: 670 GXPPXXXPXXXXGPPPPXXXXTXXXXXXXXXXXXXXXXXPXXXXPXPXPPPP 825
           G PP   P    GPPPP                      P    P P PPPP
Sbjct: 17  GFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPP---PPPPGPPPP 65


>05_03_0446 + 14111667-14111906,14112011-14112418
          Length = 215

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 25/83 (30%), Positives = 35/83 (42%)
 Frame = -3

Query: 345 AAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMR 166
           A+ AAP P+     R  +L P+K+LA+      S+S AA           TA S + R  
Sbjct: 96  ASPAAPGPKRFTARRHVSLRPTKSLAHLSPARASSSAAAG------GGSATAPSGACRYD 149

Query: 165 AE*THANSAFDTIFSFERASCRR 97
            E ++A    D   S      RR
Sbjct: 150 VEGSYAARCLDVFASASAGEQRR 172


>03_02_0774 +
           11074508-11074880,11076270-11076370,11076453-11076509,
           11076596-11076690,11077480-11077579,11078272-11078330,
           11078874-11079001,11079362-11079440,11079708-11079795,
           11080490-11080590,11080822-11080900,11081740-11081850,
           11082655-11082750,11082885-11083007,11085750-11085947,
           11086071-11086172,11086570-11086634,11086888-11087008,
           11088540-11088697,11088823-11088973,11089414-11089521,
           11089939-11090031,11090285-11090321,11090659-11090906,
           11091396-11091542,11091929-11092099,11092166-11092175,
           11093360-11093505
          Length = 1114

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 351 HPAAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAA 226
           +P +  AP P P+L++  +TL+P  A A    + G    AAA
Sbjct: 20  YPPSSPAPPPRPLLLL-PKTLIPPAAAAMEFPRRGRRDVAAA 60


>01_06_1114 +
           34619597-34619972,34620772-34620852,34621294-34621394,
           34621958-34622045,34622192-34622457
          Length = 303

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 348 PAAGAAPTPEPMLVIRSRTLMPSKALANRPGQY 250
           P AG  P+ EP +  +S +  PS++  + PG++
Sbjct: 139 PMAGLGPSTEPQMPEKSPSASPSESSNHAPGRF 171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,385,466
Number of Sequences: 37544
Number of extensions: 380723
Number of successful extensions: 1119
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)