Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_B14
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 113 2e-25
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 109 2e-24
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.6
Z81030-5|CAB02709.1| 324|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 29 6.0
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 29 6.0
U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical pr... 29 6.0
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 29 6.0
AF036704-5|AAB88558.2| 360|Caenorhabditis elegans Hypothetical ... 28 7.9
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 113 bits (272), Expect = 2e-25
Identities = 51/77 (66%), Positives = 65/77 (84%)
Frame = +2
Query: 128 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 307
M S ELACVY+ALIL DD+VA+TGEKI+T+LKAA V+ EPYWPGLFAKALEG++V++LI
Sbjct: 1 MASNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPYWPGLFAKALEGVDVKNLI 60
Query: 308 TNIGSGVGAAPAAGWSA 358
T++ SG G+ PA +A
Sbjct: 61 TSVSSGAGSGPAPAAAA 77
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 432 SDDDMGFGLFD 464
SDDDMGFGLFD
Sbjct: 101 SDDDMGFGLFD 111
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 109 bits (263), Expect = 2e-24
Identities = 50/77 (64%), Positives = 64/77 (83%)
Frame = +2
Query: 128 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 307
M S ELACVY+ALIL DD+VA+TGEKI+T+LKAA V+ EP WPGLFAKALEG++V++LI
Sbjct: 1 MASNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPNWPGLFAKALEGVDVKNLI 60
Query: 308 TNIGSGVGAAPAAGWSA 358
T++ SG G+ PA +A
Sbjct: 61 TSVSSGAGSGPAPAAAA 77
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 432 SDDDMGFGLFD 464
SDDDMGFGLFD
Sbjct: 101 SDDDMGFGLFD 111
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/59 (27%), Positives = 16/59 (27%)
Frame = +1
Query: 649 PLXXGXXGXPPXXXPXXXXGPPPPXXXXTXXXXXXXXXXXXXXXXXPXXXXPXPXPPPP 825
P G PP P PPPP P P P PPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/59 (27%), Positives = 16/59 (27%)
Frame = +1
Query: 649 PLXXGXXGXPPXXXPXXXXGPPPPXXXXTXXXXXXXXXXXXXXXXXPXXXXPXPXPPPP 825
P G PP P PPPP P P P PPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/59 (27%), Positives = 16/59 (27%)
Frame = +1
Query: 649 PLXXGXXGXPPXXXPXXXXGPPPPXXXXTXXXXXXXXXXXXXXXXXPXXXXPXPXPPPP 825
P G PP P PPPP P P P PPPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
>Z81030-5|CAB02709.1| 324|Caenorhabditis elegans Hypothetical
protein C01G10.7 protein.
Length = 324
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 116 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPY 253
S KM+ K + S ++ ++D VA+T + + + AAA+D PY
Sbjct: 34 SNQKMLDKVPMMQADSVVLELEDGVALTAKADARVRAAAALDKLPY 79
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 432 SDDDMGFGLFD 464
SDDDMGFGLFD
Sbjct: 302 SDDDMGFGLFD 312
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 432 SDDDMGFGLFD 464
SDDDMGFGLFD
Sbjct: 97 SDDDMGFGLFD 107
>U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical
protein B0432.7 protein.
Length = 621
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 152 CVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 322
C ++ L + DDD +T + + +L+ V PG+ A G NV + IGS
Sbjct: 269 CTFNVLTIGDDDCMMTRQIAADLLRRLVVSESSTTPGVPTLASTGKNVLNYGFFIGS 325
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 432 SDDDMGFGLFD 464
SDDDMGFGLFD
Sbjct: 100 SDDDMGFGLFD 110
>AF036704-5|AAB88558.2| 360|Caenorhabditis elegans Hypothetical
protein ZK185.1 protein.
Length = 360
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -3
Query: 150 ANSAFDTIFSFERASCRRP*LKREQARLSSDNKEQIL 40
A++++ IFSF + R +KRE AR S + + ++L
Sbjct: 190 ASTSYTIIFSFHKVDKARRRIKREMARKSLERRLRVL 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,841,313
Number of Sequences: 27780
Number of extensions: 253814
Number of successful extensions: 681
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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