Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_B12
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   5.1  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   6.8  

>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
 Frame = +3

Query: 705 PPXSPXFFXXGXXPXPXXXPXXGXXKKPPXXXXXGKXPP--XGPXXXXNPXXXLPGGP 872
           P  SP     G  P P   P      +PP        PP   G      P   LPGGP
Sbjct: 336 PAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGP 393


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 25/87 (28%), Positives = 28/87 (32%), Gaps = 4/87 (4%)
 Frame = -2

Query: 891 PXXXGXXGPXGGKXXGFXXXXXPKGGXSPFX---GXXGVFXXXPXXGXXGAXGXPPKXKX 721
           P   G  GP GG   G        GG  P        G     P  G  G  G P +   
Sbjct: 92  PGGGGAPGPLGG--GGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLG 149

Query: 720 GGXLG-VFXKPPXGXXXKKIXXXXGGG 643
           GG  G    +PP G     +    GGG
Sbjct: 150 GGGGGGALARPPGGGRGGALGRPPGGG 176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,754,470
Number of Sequences: 37544
Number of extensions: 323062
Number of successful extensions: 608
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)