Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_B06
(946 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.44
06_01_0178 + 1386981-1387505 29 5.4
07_03_0558 + 19461369-19462448 29 7.1
06_03_1326 - 29355467-29355817 29 7.1
06_02_0127 + 12140843-12140966,12141170-12141567 29 7.1
06_02_0126 + 12130409-12130532,12131015-12131373 29 7.1
02_05_0149 + 26290236-26290880 29 7.1
01_06_0791 - 32026086-32026944,32027044-32027600,32027686-320279... 29 7.1
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 7.1
06_03_0790 - 24636805-24637770 28 9.4
04_04_1179 - 31512592-31515126 28 9.4
02_04_0400 - 22608519-22608844,22609044-22609122 28 9.4
02_01_0148 - 1051121-1051192,1051378-1051512,1052343-1052396,105... 28 9.4
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 937 PPXGGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG 806
PP GGG G G G G G G GGGGG G
Sbjct: 172 PPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEG 215
>06_01_0178 + 1386981-1387505
Length = 174
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG*XG 797
GGG G G G G GAG GGGGG G G
Sbjct: 37 GGGGGGGGGGGGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGKG 80
>07_03_0558 + 19461369-19462448
Length = 359
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG*XG 797
GGG G+G G G G GL GG GG G G
Sbjct: 59 GGGGGGGLGGGGGGLGGGHGGGFGGGGGLGGGASGGVGGGGGFG 102
>06_03_1326 - 29355467-29355817
Length = 116
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG*XG 797
GGG G G G G G G GGGGG G G
Sbjct: 31 GGGRSGGGGGGGGGKGGGEGGSGKYGGGYSGGHAGGGGGAGKSG 74
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG 806
GGG G G G G G G GGGGG G
Sbjct: 6 GGGGGGGKGGGGGGGGGKGGGGGSGGGGRSGGGGGGGGGKG 46
>06_02_0127 + 12140843-12140966,12141170-12141567
Length = 173
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG*XG 797
GGG G G G G G G GGGGG G G
Sbjct: 74 GGGYGSGYGGGNGGGYGGGYGGYGGGYGGGYGGGGGGGGGGGYG 117
>06_02_0126 + 12130409-12130532,12131015-12131373
Length = 160
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG*XG 797
GGG G G G G G G GGGGG G G
Sbjct: 74 GGGYGSGYGGGNGGGYGGGYGGYGGGYGGGYGGGGGGGGYGGYG 117
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG*XG 797
GGG G G G G G G GGGGG G G
Sbjct: 101 GGGYGGGGGGGGYGGYGGYGGGGYEGYGRGYGGGGGGGGYGGGG 144
>02_05_0149 + 26290236-26290880
Length = 214
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG*XG 797
GGG G G G G G G GGGGG G G
Sbjct: 134 GGGGGGGGGRNYGGGSGGIGGYGNYGGGYNGEPGGGGGGAGEGG 177
>01_06_0791 -
32026086-32026944,32027044-32027600,32027686-32027903,
32028171-32028261
Length = 574
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 194 TRHPRDVTWDKQVGGGKVFGT 256
T +PR +T +++GGG VFGT
Sbjct: 403 TGNPRGLTMKQRIGGGLVFGT 423
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG*XG 797
GGG G G G G G G GGGGG G G
Sbjct: 57 GGGGGYGGGGVGGGYGGGGGGYGGGGGGYGGGGRGGGGGGGYGG 100
>06_03_0790 - 24636805-24637770
Length = 321
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG*XG 797
GGG G G G G G G GGGGG G G
Sbjct: 91 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGG 134
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG*XG 797
GGG G G G G G G GGGGG G G
Sbjct: 93 GGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGG 136
>04_04_1179 - 31512592-31515126
Length = 844
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 183 TANWISFFVLPINFCVDTH 127
TA+W +F VLP N+C+ H
Sbjct: 86 TASWYNFSVLPGNYCLRLH 104
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG*XG 797
GGG G G G G G G GGGGG G G
Sbjct: 34 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGG 77
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 928 GGGXXXGVGXXXXGXXGXXXXXXXXGAGLXLXXXGGGGGXG*XG 797
GGG G G G G G G GGGGG G G
Sbjct: 36 GGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGG 79
>02_01_0148 -
1051121-1051192,1051378-1051512,1052343-1052396,
1052501-1052581,1052667-1052826,1053346-1053453,
1053543-1053718,1053952-1054002,1054154-1054264,
1054493-1054547,1055667-1055789,1055922-1056007,
1056235-1056349,1056429-1056667
Length = 521
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 180 ANWISFFVLPINFCVDTHQDRGEEI 106
A W F LP + +D H DR E++
Sbjct: 69 ALWAHFHRLPARYALDVHADRAEDV 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,528,185
Number of Sequences: 37544
Number of extensions: 416358
Number of successful extensions: 1544
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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