Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_B04
(973 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.23
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.23
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.23
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.2
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.8
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 3.8
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 3.8
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 29 6.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 6.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 6.6
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.6
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 8.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 8.7
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.23
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXFPPXKXTPPPP 470
PP + PPP P GG PP +PPPP
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Score = 32.7 bits (71), Expect = 0.41
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +3
Query: 387 PPPXPFFXPXXGGGGGXFPPXKXTPPPPXXXGXSFXXXXXXXXXXXXXXXXXXXXGGHXX 566
PPP P P G G PP PPP G G
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 567 LPPPPR 584
PPPPR
Sbjct: 299 PPPPPR 304
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXFPPXKXTPPPPXXXG 482
PP PPP P G PP +PPPP G
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.23
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXFPPXKXTPPPP 470
PP + PPP P GG PP +PPPP
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Score = 32.7 bits (71), Expect = 0.41
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +3
Query: 387 PPPXPFFXPXXGGGGGXFPPXKXTPPPPXXXGXSFXXXXXXXXXXXXXXXXXXXXGGHXX 566
PPP P P G G PP PPP G G
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 567 LPPPPR 584
PPPPR
Sbjct: 320 PPPPPR 325
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXFPPXKXTPPPPXXXG 482
PP PPP P G PP +PPPP G
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.23
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXFPPXKXTPPPP 470
PP + PPP P GG PP +PPPP
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Score = 32.7 bits (71), Expect = 0.41
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +3
Query: 387 PPPXPFFXPXXGGGGGXFPPXKXTPPPPXXXGXSFXXXXXXXXXXXXXXXXXXXXGGHXX 566
PPP P P G G PP PPP G G
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 567 LPPPPR 584
PPPPR
Sbjct: 305 PPPPPR 310
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXFPPXKXTPPPPXXXG 482
PP PPP P G PP +PPPP G
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXX-GGGGGXFPPXKXTPPPP 470
PP PPP P GGGGG +PP T P P
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGP 819
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXX-GGGGGXFPPXKXTPPPP 470
PP PPP P GGGGG +PP T P P
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGP 819
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXFPPXKXTPPPP 470
PP PPP P GG PP PPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Frame = +3
Query: 387 PPPXPFFXPXXGG-----GGGXFPPXKXTPPPPXXXG 482
PPP P P GG G PP PPPP G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXFPPXKXTPPPP 470
PP PPP P GG PP PPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Frame = +3
Query: 387 PPPXPFFXPXXGG-----GGGXFPPXKXTPPPPXXXG 482
PPP P P GG G PP PPPP G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXFPPXKXTPPPP 470
PP PPP P GG PP PPPP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Frame = +3
Query: 387 PPPXPFFXPXXGG-----GGGXFPPXKXTPPPPXXXG 482
PPP P P GG G PP PPPP G
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 332
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 389 PPXSFFXPXXGGGGGXFSXXKKXPPPP 469
PP S GGGGG ++ PPPP
Sbjct: 40 PPCSSSSYATGGGGGSYAAAPALPPPP 66
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 389 PPXSFFXPXXGGGGGXFSXXKKXPPPP 469
PP S GGGGG ++ PPPP
Sbjct: 40 PPCSSSSYATGGGGGSYAAAPALPPPP 66
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 387 PPPXPFFXPXXGGGGGXFPPXKXTPPPP 470
PPP P F P GG P + PPP
Sbjct: 725 PPPPPQFFPMIGGPPLMHPTFSTSAPPP 752
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 387 PPPXPFFXPXXGGGGGXFPPXKXTPPPPXXXG 482
PPP P P G G PP PPPP G
Sbjct: 634 PPPPPMGLPAVGAGAPPPPP----PPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 387 PPPXPFFXPXXGGGGGXFPPXKXTPPPPXXXG 482
PPP P P G G PP PPPP G
Sbjct: 460 PPPPPMGLPAVGAGAPPPPP----PPPPSGAG 487
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 7/44 (15%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXF-----PPXKXT--PPPP 470
PP K PPP P P G G PP K T PPPP
Sbjct: 128 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPP 171
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 7/44 (15%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXF-----PPXK--XTPPPP 470
PP K PPP P P G G PP K TPPPP
Sbjct: 252 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPP 295
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 7/44 (15%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXF-----PPXK--XTPPPP 470
PP K PPP P P G G PP K TPPPP
Sbjct: 34 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPP 77
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 7/44 (15%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXXGGGGGXF-----PPXKXT--PPPP 470
PP K PPP P P G G PP K T PPPP
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPP 140
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXX-GGGGGXFPPXKXTPPPPXXXG 482
PP PPP P GGGGG +PP T P G
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNG 823
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 360 PPXKKXXXQPPPXPFFXPXX-GGGGGXFPPXKXTPPPPXXXG 482
PP PPP P GGGGG +PP T P G
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNG 823
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,624,459
Number of Sequences: 27780
Number of extensions: 125319
Number of successful extensions: 742
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2521399358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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