Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_B02
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-145|ABI30963.1|  927|Drosophila melanogaster CG3019-PF,...    30   3.7  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    30   4.9  
AE014296-2501|AAS65002.1|  119|Drosophila melanogaster CG33259-P...    29   6.5  

>AE014298-145|ABI30963.1|  927|Drosophila melanogaster CG3019-PF,
           isoform F protein.
          Length = 927

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 209 LPMPCPLVXQEYCKAGCLCKXGYLKXDSGXCVARXXC 319
           L  PC LV    C  GC C  G+ +  +G C+    C
Sbjct: 885 LGKPC-LVRHIRCPDGCYCNKGFARNAAGTCIPLRRC 920


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 115   VLCTADLCSENEIYVKCVQAHCGPRXVLRE 204
             V C  ++  ENEI   C  + CGP  V R+
Sbjct: 13459 VQCKPEIAYENEIRTPCSPSPCGPNAVCRD 13488


>AE014296-2501|AAS65002.1|  119|Drosophila melanogaster CG33259-PA
           protein.
          Length = 119

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +2

Query: 179 AAQGTCSEKDLPMPCPLVXQEYCKAGCLCKXGY-LKXDSGXCVARXXCPNSDLCSE 343
           A   TC  K  P  C L+    C   C+CK GY +      CV R  CP   L S+
Sbjct: 39  ACPETCDTKGKPN-CTLI----CGGPCVCKPGYVVNRMIPACVLRSDCPKIVLQSD 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,568,513
Number of Sequences: 53049
Number of extensions: 434780
Number of successful extensions: 856
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)