Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_A10
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 81 2e-16
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 43 7e-05
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 39 0.001
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 38 0.002
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 38 0.003
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 36 0.006
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 35 0.014
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 35 0.018
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 34 0.032
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 33 0.056
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 33 0.074
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 32 0.097
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 31 0.17
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 31 0.17
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 31 0.17
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 31 0.30
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 30 0.39
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 30 0.39
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 30 0.52
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 29 0.69
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 29 0.91
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 29 1.2
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 29 1.2
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 28 1.6
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 28 1.6
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 28 1.6
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 28 2.1
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 27 3.7
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 27 3.7
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 27 4.8
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 27 4.8
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 26 8.5
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 26 8.5
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 8.5
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 26 8.5
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 26 8.5
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 81.4 bits (192), Expect = 2e-16
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 8/164 (4%)
Frame = +3
Query: 276 IQAKFKSDXGXXTGSPLDLPLNITXDXLQLICNALLQ--EXXKPFLFFVKDVEITTTIKD 449
+ +F++ + L +P N + L+ + N LL+ + P+ F + + T I+D
Sbjct: 31 VNVQFRASDDSNELASLLVPGNSSVRQLEALLNQLLENSDDPVPYNFALHHEDETIEIQD 90
Query: 450 ALDLKT-----LNSEEVVXXXYXQQAVFRVRPVXRCXSSIPGHAEAVISTCFXPS-GKKL 611
L + +E+ + Y QAVFRVR V RC +S+ GH +IS F PS +L
Sbjct: 91 NLYTSVFHNGLMKTEDHLTLLYTPQAVFRVRAVTRCTASMNGHDGTIISAQFSPSTSSRL 150
Query: 612 AXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXLAS 743
T R WD + Q P+ GH+ WV C W+P +A+
Sbjct: 151 VTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIAT 194
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +3
Query: 546 SSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPX 725
+++ GH AV + + L T++ WD+ + GH V WSP
Sbjct: 425 ATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPD 484
Query: 726 GXXLAS 743
G +AS
Sbjct: 485 GQRVAS 490
Score = 32.7 bits (71), Expect = 0.074
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = +3
Query: 546 SSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPL-HVCXGHSXWVLCXXWSP 722
+++ GH V + P +A T+RFWD P+ H+ ++ W P
Sbjct: 171 ATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQP 230
Query: 723 XGXXLASXCNPXXLFXGS 776
LA P L GS
Sbjct: 231 --LHLAPDSGPYLLASGS 246
Score = 32.3 bits (70), Expect = 0.097
Identities = 19/62 (30%), Positives = 23/62 (37%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXL 737
GH + V F P G+ +A +VR WD L GH V WS L
Sbjct: 387 GHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLL 446
Query: 738 AS 743
S
Sbjct: 447 VS 448
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 552 IPGHAEAVISTCFXPSGKKLAXXXXXXTVRFW 647
+PGH + V + + P G+++A VR W
Sbjct: 469 LPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Frame = +3
Query: 561 HAEAVISTCFXP------SGKKL-AXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXW 716
H + +++ C+ P SG L A TVR W++ + L GH+ + C W
Sbjct: 219 HTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRW 277
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 42.7 bits (96), Expect = 7e-05
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +3
Query: 522 VRPVXRCXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWV 701
++P C ++ GH + V+S P + +++FWDL C GH V
Sbjct: 524 IKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSV 583
Query: 702 LCXXWSPXGXXLAS 743
+ +SP G AS
Sbjct: 584 ISVCFSPDGRQFAS 597
Score = 34.7 bits (76), Expect = 0.018
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXP 668
GH +VIS CF P G++ A R W ++ P
Sbjct: 578 GHKNSVISVCFSPDGRQFASGSGDLRARIWSIDPASP 614
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 573 VISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXLAS 743
V + F P GK L ++ WDL+ Q +V GH + +S G + S
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVS 419
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 552 IPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDL 653
+ GH E+V S F P L T++ W+L
Sbjct: 480 LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWEL 513
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXL 737
GH+E + S P G ++ R WDL + V H ++ WSP G L
Sbjct: 305 GHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQL 364
Query: 738 AS 743
A+
Sbjct: 365 AT 366
Score = 35.5 bits (78), Expect = 0.010
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = +3
Query: 552 IPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGX 731
+ GH V F PSG L T R WD++ L + GHS + P G
Sbjct: 261 LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGS 320
Query: 732 XLASXCN 752
++S N
Sbjct: 321 LVSSGGN 327
Score = 32.3 bits (70), Expect = 0.097
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 561 HAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWV 701
H +++ + P+G +LA TV+ WDL H HS V
Sbjct: 348 HIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLV 394
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +3
Query: 540 CXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVC-XGHSXWVLCXXW 716
C GH V+S P +++ T++ W++ + GHS WV C +
Sbjct: 97 CTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRF 156
Query: 717 SP 722
SP
Sbjct: 157 SP 158
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 633 TVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXLAS 743
T+R WDL H GH+ VL SP + S
Sbjct: 86 TIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVS 122
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 37.5 bits (83), Expect = 0.003
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXL 737
GH + F P G A T R WD+ PL V GH V C + P L
Sbjct: 443 GHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYL 502
Query: 738 AS 743
A+
Sbjct: 503 AT 504
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXL 737
GH V F P+ LA T R WD+ + V H V S G L
Sbjct: 485 GHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSL 544
Query: 738 AS 743
AS
Sbjct: 545 AS 546
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +3
Query: 540 CXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWS 719
C + GH + ++S P GK + T++FW + GH+ V+ S
Sbjct: 504 CKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVS 563
Query: 720 PXGXXLAS 743
P G A+
Sbjct: 564 PNGHCFAT 571
Score = 33.1 bits (72), Expect = 0.056
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDL 653
GH E+V S F P GK L T++ W+L
Sbjct: 456 GHEESVYSVAFSPDGKYLVSGSLDNTIKLWEL 487
Score = 32.7 bits (71), Expect = 0.074
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 573 VISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXLAS 743
V S F P GK LA +R WD+ + + GH + +S G L S
Sbjct: 337 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVS 393
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 35.1 bits (77), Expect = 0.014
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 519 RVRPVXRCXSSIPGHAEAVISTCFXP-SGKKLAXXXXXXTVRFWDL-NXQXPLHVCXGHS 692
R+ P I H++A+ + P + LA TV WDL N LH GH
Sbjct: 266 RLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHE 325
Query: 693 XWVLCXXWSP 722
V WSP
Sbjct: 326 DEVYGLEWSP 335
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 34.7 bits (76), Expect = 0.018
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +3
Query: 537 RCXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXW 716
R ++ GH + + K LA T+R WD + + GH+ +V +
Sbjct: 87 RLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDF 146
Query: 717 SPXGXXLAS 743
+P G L S
Sbjct: 147 NPLGTLLVS 155
Score = 32.3 bits (70), Expect = 0.097
Identities = 23/76 (30%), Positives = 29/76 (38%)
Frame = +3
Query: 516 FRVRPVXRCXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSX 695
F R RC + GH V S F P G L TVR W+L L + HS
Sbjct: 125 FEKRCSVRC---LKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSE 181
Query: 696 WVLCXXWSPXGXXLAS 743
++ S G A+
Sbjct: 182 PIISVSISADGTLCAT 197
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = +3
Query: 540 CXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDL 653
C +P H+E +IS G A R WD+
Sbjct: 172 CLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDV 209
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 33.9 bits (74), Expect = 0.032
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Frame = +3
Query: 549 SIPGHAEAVISTCFXPSGKK--LAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSP 722
S GH + + CF LA VR WDLN + V GHS + + P
Sbjct: 140 SFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEP 199
Query: 723 XGXXLAS 743
G L S
Sbjct: 200 TGSFLLS 206
Score = 33.9 bits (74), Expect = 0.032
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXL 737
GH V + F P ++LA T+R W+++ Q + GH+ +L + G +
Sbjct: 505 GHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQV 564
Query: 738 AS 743
S
Sbjct: 565 VS 566
Score = 29.5 bits (63), Expect = 0.69
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = +3
Query: 552 IPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXP----LHVCXGHSXWVLCXXWS 719
+ GH + V++ G LA TVR W+LN + +HV GH+ V
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALG 419
Query: 720 P 722
P
Sbjct: 420 P 420
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/54 (27%), Positives = 20/54 (37%)
Frame = +3
Query: 528 PVXRCXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGH 689
P R S+ H VI+ P+ LA V+ WD+ H GH
Sbjct: 91 PSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGH 144
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/69 (24%), Positives = 27/69 (39%)
Frame = +3
Query: 537 RCXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXW 716
R +I H V + G+ +A T++ WD + + V GH V +
Sbjct: 456 RAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSF 515
Query: 717 SPXGXXLAS 743
+P LAS
Sbjct: 516 NPFSRQLAS 524
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 33.1 bits (72), Expect = 0.056
Identities = 16/64 (25%), Positives = 25/64 (39%)
Frame = +3
Query: 552 IPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGX 731
+ GH V S F P LA + +D+ + GH+ W+ ++P G
Sbjct: 183 LSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQLRGHAAWIFAVAFNPVGD 242
Query: 732 XLAS 743
L S
Sbjct: 243 LLLS 246
Score = 29.9 bits (64), Expect = 0.52
Identities = 16/69 (23%), Positives = 24/69 (34%)
Frame = +3
Query: 561 HAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXLA 740
H S+C P G+ +A + WD + + LC +SP G +
Sbjct: 102 HPSECWSSCISPDGQTIAFTSVDGRIAVWDNPSDCKISELDTKGKFGLCIDYSPNGRFIV 161
Query: 741 SXCNPXXLF 767
S LF
Sbjct: 162 SGHQTGQLF 170
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 32.7 bits (71), Expect = 0.074
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +3
Query: 540 CXSSIPGHAEAVISTCFXPS--GKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXX 713
C +++ GH ++ F + LA T R +DL + V GH V C
Sbjct: 240 CIATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVFDLRAMKDVRVLRGHEKDVNCVT 299
Query: 714 WSP 722
W P
Sbjct: 300 WHP 302
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 32.3 bits (70), Expect = 0.097
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 549 SIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXG 728
S+P H +AVI F P+ L +R WD+ L GH +LC +P G
Sbjct: 322 SLP-HEQAVIDCKFLPNTPYLLTACADCVIRKWDVRSGQLLGEYTGHQEPILCMAITPDG 380
Score = 30.3 bits (65), Expect = 0.39
Identities = 16/76 (21%), Positives = 30/76 (39%)
Frame = +3
Query: 552 IPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGX 731
+ GH +++++ + G +A VR W + ++ W P G
Sbjct: 100 LTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSWHPKGL 159
Query: 732 XLASXCNPXXLFXGSL 779
LA+ CN ++ SL
Sbjct: 160 FLAAGCNDGSIWMWSL 175
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 555 PGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLN 656
PGH++ V +T F +G + T+ WDLN
Sbjct: 86 PGHSKIVTTTTFDKNGSRFYTGSLDNTIHCWDLN 119
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 585 CFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXLA 740
CF P + LA T++ +D + L V + + C WSP G +A
Sbjct: 329 CFSPDYQYLALVSERGTLKLFDFVKEHVLDVFHSYFAGLTCVTWSPDGKFIA 380
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSP 722
GH V F P G A T + W + PL V GH V C + P
Sbjct: 419 GHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHP 473
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXL 737
GH V F P+ + T R WD++ + V GH+ V +P G +
Sbjct: 461 GHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTM 520
Query: 738 AS 743
AS
Sbjct: 521 AS 522
Score = 29.5 bits (63), Expect = 0.69
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +3
Query: 561 HAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXLA 740
H+ V T F P K L + R W ++ + L GH+ V + P G A
Sbjct: 378 HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFA 437
Query: 741 S 743
+
Sbjct: 438 T 438
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/62 (20%), Positives = 21/62 (33%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXGXXL 737
GH + V + P G +A + WD+ + GH + +S L
Sbjct: 503 GHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVL 562
Query: 738 AS 743
S
Sbjct: 563 VS 564
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/67 (23%), Positives = 23/67 (34%)
Frame = +3
Query: 522 VRPVXRCXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWV 701
VR ++ GH+ V + G +LA V+ WD P H+ V
Sbjct: 290 VRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAV 349
Query: 702 LCXXWSP 722
W P
Sbjct: 350 KAVAWCP 356
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 30.3 bits (65), Expect = 0.39
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 540 CXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLN 656
C + + GH+ V+ F PS + TVR WD++
Sbjct: 129 CIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDIS 167
Score = 29.9 bits (64), Expect = 0.52
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +3
Query: 549 SIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWSPXG 728
S+ GH + V F + T+R W+ + + + GHS +V+C + P
Sbjct: 90 SLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSE 149
Query: 729 XXLAS 743
+ S
Sbjct: 150 DLIVS 154
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 30.3 bits (65), Expect = 0.39
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 318 SPLDLPLNITXDXLQLICNALLQ-EXXKPFLFFVKDVEITTTIKDALDLKTLNSEEVVXX 494
+P+ +P ++ L I N LL+ E PF F V+ + TT+ + + L++E ++
Sbjct: 27 TPIFVPTSLKRYGLSQIVNHLLKTEKPTPFDFLVQGQLLKTTLDEYIVQNGLSTESILDI 86
Query: 495 XYXQQAV 515
Y Q +
Sbjct: 87 EYIQSTL 93
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 29.9 bits (64), Expect = 0.52
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 558 GHAEAVISTCFXPSG-KKLAXXXXXXTVRFWDLNX-QXPLHVCXGHSXWVLCXXWSPXGX 731
G++EA F PS + ++ WD+ + P H+ VLC +SP G
Sbjct: 175 GNSEAARDVVFSPSEPNEFVAAYDSGILQKWDIRFPKLPFLKLAAHNGVVLCVNYSPNGV 234
Query: 732 XLAS 743
LAS
Sbjct: 235 FLAS 238
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 29.5 bits (63), Expect = 0.69
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 549 SIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDL 653
++ GH V S F SG LA TVR WD+
Sbjct: 462 TLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDI 496
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +3
Query: 540 CXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDL 653
C + H AV CF G L +VR WDL
Sbjct: 373 CIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDL 410
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 29.1 bits (62), Expect = 0.91
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 552 IPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLC 707
+ GH+ V TC KL T+R W+ + + GH+ VLC
Sbjct: 309 LEGHSSGV--TCLQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLC 358
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 537 RCXSSI-PGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLC 707
RC + GH++ V+ C LA T+R W+L + + GHS V C
Sbjct: 263 RCRQVVLSGHSDGVM--CLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTC 318
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/54 (27%), Positives = 20/54 (37%)
Frame = +3
Query: 540 CXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWV 701
C + GH V S PS ++ +R W+L L GHS V
Sbjct: 609 CLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELLQTLHGHSNLV 662
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 549 SIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDL 653
++ GH + V+ P+G+ + T+RFW L
Sbjct: 499 TLKGHTDRVLYLAMSPNGENIVTGAADETLRFWKL 533
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = +3
Query: 540 CXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWV 701
C + GH+ + S + P ++R WDL+ +V GH +V
Sbjct: 539 CLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFV 592
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +3
Query: 540 CXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWV 701
C + GH V T +L T+R WDLN PL V +S ++
Sbjct: 581 CKYVLEGHDAFV--TLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYI 632
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 561 HAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLC 707
H+E + S F LA TV+ WD+ L GHS +V C
Sbjct: 331 HSEYITSLDFSHPFGTLATASTDKTVKVWDMAGVVYLGSLKGHSDYVSC 379
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 633 TVRFWDLNXQXPLHVCXGHSXWVLC 707
TV WD+N + L+ GHS VLC
Sbjct: 242 TVSVWDVNSRFILYKLYGHSGSVLC 266
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVL 704
GH+ +V+ F L T+ WD + PL V GH+ VL
Sbjct: 259 GHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVL 307
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/64 (18%), Positives = 23/64 (35%)
Frame = +3
Query: 528 PVXRCXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLC 707
P C + GH +V S + + T+R WD+ + + H + C
Sbjct: 335 PAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIAC 394
Query: 708 XXWS 719
++
Sbjct: 395 AQYN 398
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/61 (24%), Positives = 22/61 (36%)
Frame = +3
Query: 540 CXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWS 719
C + H + + + S +LA + WD PLH H+ V WS
Sbjct: 241 CAEMMKVHEQEICGLQWDRSLGQLASGGNDNNLFVWDYRSSRPLHKFEEHTAAVKAIGWS 300
Query: 720 P 722
P
Sbjct: 301 P 301
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = +3
Query: 528 PVXRCXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXP 668
P + +++ H V+ P G+ + T+RFW L + P
Sbjct: 367 PSLKNIANLTAHTNRVLYLSMSPDGQSIVTGAGDETLRFWKLFNKKP 413
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/54 (24%), Positives = 19/54 (35%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWS 719
G V S + G +LA + WD+ + GHS V W+
Sbjct: 164 GATNHVTSVLWTGKGTQLAVGTDSGVIYIWDIESTKSVRSLKGHSERVAALAWN 217
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWV 701
GH V + P+ L R WD+ + +HV GH V
Sbjct: 245 GHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTV 292
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 555 PGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDL 653
PGH + V S P+ + T+R WDL
Sbjct: 109 PGHKQTVTSIDVSPADETFLSASLDNTIRLWDL 141
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 26.6 bits (56), Expect = 4.8
Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +3
Query: 540 CXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCX--GHSXWVLCXX 713
C + + H + V + P+ L ++ FW + C GH+ V
Sbjct: 415 CLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWALA 474
Query: 714 WSPXGXXLASXCNPXXLF 767
+SP G LAS N +F
Sbjct: 475 FSPNGNTLASADNDGNVF 492
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDL 653
GH V + F GK LA TV+ WD+
Sbjct: 81 GHTNNVTAIAFHCDGKWLATSSEDGTVKVWDM 112
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +3
Query: 549 SIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGH 689
++ GH AV + F G +LA + WD+ + L GH
Sbjct: 99 TLNGHKSAVTTMDFDKMGTRLASGSMDTDIIVWDIVAETGLFRLRGH 145
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +3
Query: 561 HAEAVISTCFXPSGKKLAXXXXXXTVRFWDL 653
H+++V++ + P+G LA T + WD+
Sbjct: 299 HSDSVLTGSWHPNGNILATGGQDTTAKVWDI 329
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 8.5
Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 14/76 (18%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDL------------NXQXPLHVC--XGHSX 695
GH ++ S P G ++A T+R W N P +C H+
Sbjct: 16 GHRLSIFSIHIHPDGSRIATGGLDGTIRIWSTEAINRENENENENEDLPKQLCCMSTHTG 75
Query: 696 WVLCXXWSPXGXXLAS 743
V +SP G LAS
Sbjct: 76 TVTSVRFSPNGQYLAS 91
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +3
Query: 513 VFRVRPVXRCXSSIPGHAEAVISTCFXPSGKKLAXXXXXXTVRFWDL 653
++ +R + R H AV+S F P+G++ T+R +++
Sbjct: 256 MYDMRNLKRALHVYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRIYNV 302
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 558 GHAEAVISTCFXPSGKKLAXXXXXXTVRFWDLNXQXPLHVCXGHSXWVLCXXWS 719
GHA ++ F +G LA +V WDL+ V GH+ + WS
Sbjct: 25 GHATSIR---FSTNGYHLASGLVNGSVVIWDLSTFSVSRVLTGHTRAIQSVCWS 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,541,510
Number of Sequences: 5004
Number of extensions: 37910
Number of successful extensions: 174
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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